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氨基酸的基本热化学性质:气相和水相酸度以及气相生成热。

Fundamental thermochemical properties of amino acids: gas-phase and aqueous acidities and gas-phase heats of formation.

机构信息

Chemistry Department, The University of Alabama, Shelby Hall, Box 870336, Tuscaloosa, Alabama 35487-0336, USA.

出版信息

J Phys Chem B. 2012 Mar 8;116(9):2905-16. doi: 10.1021/jp207271p. Epub 2012 Feb 23.

Abstract

The gas-phase acidities of the 20 L-amino acids have been predicted at the composite G3(MP2) level. A broad range of structures of the neutral and anion were studied to determine the lowest energy conformer. Excellent agreement is found with the available experimental gas-phase deprotonation enthalpies, and the calculated values are within experimental error. We predict that tyrosine is deprotonated at the CO(2)H site. Cysteine is predicted to be deprotonated at the SH but the proton on the CO(2)H is shared with the S(-) site. Self-consistent reaction field (SCRF) calculations with the COSMO parametrization were used to predict the pK(a)'s of the non-zwitterion form in aqueous solution. The differences in the non-zwitterion pK(a) values were used to estimate the free energy difference between the zwitterion and nonzwitterion forms in solution. The heats of formation of the neutral compounds were calculated from atomization energies and isodesmic reactions to provide the first reliable set of these values in the gas phase. Further calculations were performed on five rare amino acids to predict their heats of formation, acidities, and pK(a) values.

摘要

20 种 L-氨基酸的气相酸度已在复合 G3(MP2)水平上进行了预测。研究了中性和阴离子的广泛结构,以确定最低能量构象。与可用的实验气相去质子化焓具有极好的一致性,并且计算值在实验误差范围内。我们预测酪氨酸在 CO(2)H 位点上被去质子化。预测半胱氨酸在 SH 上被去质子化,但 CO(2)H 上的质子与 S(-)位点共享。使用具有 COSMO 参数化的自洽反应场 (SCRF) 计算来预测水溶液中非两性离子形式的 pK(a)'。非两性离子 pK(a)值的差异用于估计两性离子和非两性离子形式在溶液中的自由能差异。中性化合物的生成热是通过原子化能和等电子反应计算得出的,为气相中提供了第一组可靠的这些值。对五种稀有氨基酸进行了进一步的计算,以预测它们的生成热、酸度和 pK(a)值。

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