Department of Biological Chemistry & Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.
J Biol Chem. 2012 Mar 30;287(14):11410-21. doi: 10.1074/jbc.M111.337683. Epub 2012 Feb 2.
The E3 ubiquitin ligase Cullin-ring ligase 4-Cdt2 (CRL4(Cdt2)) is emerging as an important cell cycle regulator that targets numerous proteins for destruction in S phase and after DNA damage, including Cdt1, p21, and Set8. CRL4(Cdt2) substrates contain a "PIP degron," which consists of a canonical proliferating cell nuclear antigen (PCNA) interaction motif (PIP box) and an adjacent basic amino acid. Substrates use their PIP box to form a binary complex with PCNA on chromatin and the basic residue to recruit CRL4(Cdt2) for substrate ubiquitylation. Using Xenopus egg extracts, we identify an acidic residue in PCNA that is essential to support destruction of all CRL4(Cdt2) substrates. This PCNA residue, which adjoins the basic amino acid of the bound PIP degron, is dispensable for substrate binding to PCNA but essential for CRL4(Cdt2) recruitment to chromatin. Our data show that the interaction of CRL4(Cdt2) with substrates requires molecular determinants not only in the substrate degron but also on PCNA. The results illustrate a potentially general mechanism by which E3 ligases can couple ubiquitylation to the formation of protein-protein interactions.
E3 泛素连接酶 Cullin 环连接酶 4-Cdt2(CRL4(Cdt2))作为一种重要的细胞周期调节剂正在出现,它可以靶向许多蛋白质在 S 期和 DNA 损伤后进行破坏,包括 Cdt1、p21 和 Set8。CRL4(Cdt2)的底物含有一个“PIP 降解基序”,由一个典型的增殖细胞核抗原(PCNA)相互作用基序(PIP 盒)和一个相邻的碱性氨基酸组成。底物利用其 PIP 盒与染色质上的 PCNA 形成二元复合物,利用碱性残基招募 CRL4(Cdt2)进行底物泛素化。使用非洲爪蟾卵提取物,我们确定了 PCNA 中的一个酸性残基,该残基对于支持所有 CRL4(Cdt2)底物的破坏是必不可少的。这个 PCNA 残基与结合的 PIP 降解基序的碱性氨基酸相邻,对于底物与 PCNA 的结合是可有可无的,但对于 CRL4(Cdt2)向染色质的招募是必不可少的。我们的数据表明,CRL4(Cdt2)与底物的相互作用不仅需要底物降解基序中的分子决定因素,还需要 PCNA 上的分子决定因素。该结果说明了 E3 连接酶可以将泛素化与蛋白质-蛋白质相互作用的形成偶联起来的一种潜在的通用机制。