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SLC2A1单核苷酸多态性与年龄相关性黄斑变性的多中心队列关联研究

Multicenter cohort association study of SLC2A1 single nucleotide polymorphisms and age-related macular degeneration.

作者信息

Baas Dominique C, Ho Lintje, Tanck Michael W T, Fritsche Lars G, Merriam Joanna E, van het Slot Ruben, Koeleman Bobby P C, Gorgels Theo G M F, van Duijn Cornelia M, Uitterlinden André G, de Jong Paulus T V M, Hofman Albert, ten Brink Jacoline B, Vingerling Johannes R, Klaver Caroline C W, Dean Michael, Weber Bernhard H F, Allikmets Rando, Hageman Gregory S, Bergen Arthur A B

机构信息

Department of Clinical and Molecular Ophthalmogenetics, The Netherlands Institute for Neuroscience (NIN), Royal Netherlands Academy of Arts and Sciences (KNAW), Amsterdam, The Netherlands.

出版信息

Mol Vis. 2012;18:657-74. Epub 2012 Mar 17.

Abstract

PURPOSE

Age-related macular degeneration (AMD) is a major cause of blindness in older adults and has a genetically complex background. This study examines the potential association between single nucleotide polymorphisms (SNPs) in the glucose transporter 1 (SLC2A1) gene and AMD. SLC2A1 regulates the bioavailability of glucose in the retinal pigment epithelium (RPE), which might influence oxidative stress-mediated AMD pathology.

METHODS

Twenty-two SNPs spanning the SLC2A1 gene were genotyped in 375 cases and 199 controls from an initial discovery cohort (the Amsterdam-Rotterdam-Netherlands study). Replication testing was performed in The Rotterdam Study (the Netherlands) and study populations from Würzburg (Germany), the Age Related Eye Disease Study (AREDS; United States), Columbia University (United States), and Iowa University (United States). Subsequently, a meta-analysis of SNP association was performed.

RESULTS

In the discovery cohort, significant genotypic association between three SNPs (rs3754219, rs4660687, and rs841853) and AMD was found. Replication in five large independent (Caucasian) cohorts (4,860 cases and 4,004 controls) did not yield consistent association results. The genotype frequencies for these SNPs were significantly different for the controls and/or cases among the six individual populations. Meta-analysis revealed significant heterogeneity of effect between the studies.

CONCLUSIONS

No overall association between SLC2A1 SNPs and AMD was demonstrated. Since the genotype frequencies for the three SLC2A1 SNPs were significantly different for the controls and/or cases between the six cohorts, this study corroborates previous evidence that population dependent genetic risk heterogeneity in AMD exists.

摘要

目的

年龄相关性黄斑变性(AMD)是老年人失明的主要原因,且具有遗传复杂性背景。本研究探讨葡萄糖转运蛋白1(SLC2A1)基因中的单核苷酸多态性(SNP)与AMD之间的潜在关联。SLC2A1调节视网膜色素上皮(RPE)中葡萄糖的生物利用度,这可能会影响氧化应激介导的AMD病理过程。

方法

在来自初始发现队列(阿姆斯特丹 - 鹿特丹 - 荷兰研究)的375例病例和199例对照中,对跨越SLC2A1基因的22个SNP进行基因分型。在鹿特丹研究(荷兰)以及来自德国维尔茨堡、年龄相关性眼病研究(AREDS;美国)、哥伦比亚大学(美国)和爱荷华大学(美国)的研究人群中进行重复测试。随后,对SNP关联进行荟萃分析。

结果

在发现队列中,发现三个SNP(rs3754219、rs4660687和rs841853)与AMD之间存在显著的基因型关联。在五个大型独立(白种人)队列(4860例病例和4004例对照)中的重复测试未产生一致的关联结果。在六个个体人群中,这些SNP的基因型频率在对照和/或病例之间存在显著差异。荟萃分析显示各研究之间存在显著的效应异质性。

结论

未证明SLC2A1 SNP与AMD之间存在总体关联。由于六个队列之间对照和/或病例的三个SLC2A1 SNP的基因型频率存在显著差异,本研究证实了先前关于AMD中存在人群依赖性遗传风险异质性的证据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8dbd/3324365/783d9c937b74/mv-v18-657-f1.jpg

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