Chen Ying-Zhang, Matsushita Mark M, Robertson Peggy, Rieder Mark, Girirajan Santhosh, Antonacci Francesca, Lipe Hillary, Eichler Evan E, Nickerson Deborah A, Bird Thomas D, Raskind Wendy H
Department of Medicine (Medical Genetics), University of Washington, Seattle, WA 98195, USA.
Arch Neurol. 2012 May;69(5):630-5. doi: 10.1001/archneurol.2012.54.
Familial dyskinesia with facial myokymia (FDFM) is an autosomal dominant disorder that is exacerbated by anxiety. In a 5-generation family of German ancestry, we previously mapped FDFM to chromosome band 3p21-3q21. The 72.5-Mb linkage region was too large for traditional positional mutation identification.
To identify the gene responsible for FDFM by exome resequencing of a single affected individual.
We performed whole exome sequencing in 1 affected individual and used a series of bioinformatic filters, including functional significance and presence in dbSNP or the 1000 Genomes Project, to reduce the number of candidate variants. Co-segregation analysis was performed in 15 additional individuals in 3 generations.
Unique DNA variants in the linkage region that co-segregate with FDFM.
The exome contained 23 428 single-nucleotide variants, of which 9391 were missense, nonsense, or splice site alterations. The critical region contained 323 variants, 5 of which were not present in 1 of the sequence databases. Adenylyl cyclase 5 (ADCY5) was the only gene in which the variant (c.2176G>A) was co-transmitted perfectly with disease status and was not present in 3510 control white exomes. This residue is highly conserved, and the change is nonconservative and predicted to be damaging.
ADCY5 is highly expressed in striatum. Mice deficient in Adcy5 develop a movement disorder that is worsened by stress. We conclude that FDFM likely results from a missense mutation in ADCY5. This study demonstrates the power of a single exome sequence combined with linkage information to identify causative genes for rare autosomal dominant mendelian diseases.
家族性运动障碍伴面部肌束震颤(FDFM)是一种常染色体显性疾病,焦虑会使其加重。在一个有德国血统的五代家族中,我们之前将FDFM定位到染色体3p21 - 3q21带。72.5兆碱基的连锁区域对于传统的定位突变鉴定来说太大了。
通过对一名受影响个体进行外显子组重测序来鉴定导致FDFM的基因。
我们对一名受影响个体进行了全外显子组测序,并使用了一系列生物信息学筛选方法,包括功能意义以及在dbSNP或千人基因组计划中的存在情况,以减少候选变异的数量。在另外三代中的15名个体中进行了共分离分析。
连锁区域中与FDFM共分离的独特DNA变异。
外显子组包含23428个单核苷酸变异,其中9391个是错义、无义或剪接位点改变。关键区域包含323个变异,其中5个在一个序列数据库中不存在。腺苷酸环化酶5(ADCY5)是唯一变异(c.2176G>A)与疾病状态完全共传递且在3510个对照白种人外显子组中不存在的基因。该残基高度保守,这种变化是非保守的且预计具有损害性。
ADCY5在纹状体中高度表达。缺乏Adcy5的小鼠会出现运动障碍,应激会使其加重。我们得出结论,FDFM可能是由ADCY5中的错义突变导致的。这项研究证明了单个外显子组序列与连锁信息相结合在鉴定罕见常染色体显性孟德尔疾病致病基因方面的作用。