Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, United States.
J Phys Chem B. 2012 Oct 18;116(41):12398-405. doi: 10.1021/jp305022t. Epub 2012 Oct 8.
The redox properties of model chromophores from the green fluorescent protein family are characterized computationally using density functional theory with a long-range corrected functional, the equation-of-motion coupled-cluster method, and implicit solvation models. The analysis of electron-donating abilities of the chromophores reveals an intricate interplay between the size of the chromophore, conjugation, resonance stabilization, presence of heteroatoms, and solvent effects. Our best estimates of the gas-phase vertical/adiabatic detachment energies of the deprotonated (i.e., anionic) model red, green, and blue chromophores are 3.27/3.15, 2.79/2.67, and 2.75/2.35 eV, respectively. Vertical/adiabatic ionization energies of the respective protonated (i.e., neutral) species are 7.64/7.35, 7.38/7.15, and 7.70/7.32 eV, respectively. The standard reduction potentials (E(red)(0)) of the anionic (Chr•/Chr–) and neutral (Chr+•/Chr) model chromophores in acetonitrile are 0.34/1.40 V (red), 0.22/1.24 V (green), and −0.12/1.02 V (blue), suggesting, counterintuitively, that the red chromophore is more difficult to oxidize than the green and blue ones (in both neutral and deprotonated forms). The respective redox potentials in water follow a similar trend but are more positive than the acetonitrile values.
使用密度泛函理论、长程校正函数、运动方程耦合簇方法和隐式溶剂模型对绿色荧光蛋白家族的模型发色团的氧化还原性质进行了计算研究。对发色团供电子能力的分析揭示了发色团的大小、共轭、共振稳定、杂原子的存在和溶剂效应之间复杂的相互作用。我们对去质子化(即阴离子)模型红、绿、蓝发色团的气相垂直/绝热离解能的最佳估计值分别为 3.27/3.15、2.79/2.67 和 2.75/2.35 eV。相应质子化(即中性)物种的垂直/绝热电离能分别为 7.64/7.35、7.38/7.15 和 7.70/7.32 eV。在乙腈中,阴离子(Chr•/Chr–)和中性(Chr+•/Chr)模型发色团的标准还原电位(E(red)(0))分别为 0.34/1.40 V(红)、0.22/1.24 V(绿)和−0.12/1.02 V(蓝),这表明出人意料的是,红色发色团比绿色和蓝色发色团(中性和去质子化形式)更难氧化。水相中的相应氧化还原电位也呈现出类似的趋势,但比乙腈的值更正。