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神经内分泌基因的协调表达、相互作用和进化。

The coordinated expression, interaction and evolution of the neuroendocrine genes.

机构信息

Centre for Bioinformatics, School of Life Sciences, Pondicherry University, Pondicherry-605 014, India.

出版信息

Integr Biol (Camb). 2012 Nov;4(11):1377-85. doi: 10.1039/c2ib20081c.

Abstract

The neuroendocrine system is a complex biological system controlled by various neuropeptides and hormones. The evolution and network properties of neuroendocrine genes are analyzed along with their expression profiles. The neuroendocrine genes show very similar expression profiles and local network properties across a wide range of tissues consistent with the physiological roles of their proteins. Moreover, the coordinated evolution of 10 neuroendocrine genes involved in mammalian reproduction and homeostasis is demonstrated using several methods, such as correlated evolution, relative-rate test, relative-ratio test and codon usage bias. The neuroendocrine genes seem to evolve predominantly under similar selective strengths and regimes of purifying selection, which is well reflected in their evolutionary fingerprints. This result demonstrates for the first time a key role of natural selection in creating and maintaining a well-designed neuroendocrine system at the genomic level. It also indicates that component properties of a complex system at a higher physiological scale may determine component properties at a lower genomic scale and/or vice versa.

摘要

神经内分泌系统是一个由各种神经肽和激素控制的复杂生物系统。本文分析了神经内分泌基因的进化和网络特性及其表达谱。神经内分泌基因在广泛的组织中表现出非常相似的表达谱和局部网络特性,这与其蛋白质的生理功能一致。此外,本文还使用相关进化、相对速率检验、相对比值检验和密码子使用偏性等几种方法,证明了参与哺乳动物生殖和稳态的 10 个神经内分泌基因的协同进化。神经内分泌基因似乎主要在相似的选择压力和纯化选择模式下进化,这在它们的进化指纹中得到了很好的反映。这一结果首次证明了自然选择在基因组水平上对设计良好的神经内分泌系统的形成和维持起着关键作用。这也表明,在较高生理尺度上的复杂系统的组成特性可能决定了在较低基因组尺度上的组成特性,反之亦然。

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