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蛋白质中非谐动力学的物理起源:同源多肽分辨依赖中子散射的新见解。

Physical origin of anharmonic dynamics in proteins: new insights from resolution-dependent neutron scattering on homomeric polypeptides.

机构信息

Dipartimento di Fisica, Universitá di Palermo, Italy.

出版信息

Phys Rev Lett. 2012 Sep 21;109(12):128102. doi: 10.1103/PhysRevLett.109.128102. Epub 2012 Sep 19.

Abstract

Neutron scattering reveals a complex dynamics in polypeptide chains, with two main onsets of anharmonicity whose physical origin and biological role are still debated. In this study the dynamics of strategically selected homomeric polypeptides is investigated with elastic neutron scattering using different energy resolutions and compared with that of a real protein. Our data spotlight the dependence of anharmonic transition temperatures and fluctuation amplitudes on energy resolution, which we quantitatively explain in terms of a two-site model for the protein-hydration water energy landscape. Experimental data strongly suggest that the protein dynamical transition is not a mere resolution effect but is due to a real physical effect. Activation barriers and free energy values obtained for the protein dynamical transition allow us to make a connection with the two-well interaction potential of supercooled-confined water proposed to explain a low-density→high-density liquid-liquid transition.

摘要

中子散射揭示了多肽链中的复杂动力学,存在两个主要的非谐起始点,其物理起源和生物学作用仍存在争议。在这项研究中,使用不同的能量分辨率,通过弹性中子散射研究了策略性选择的同聚物多肽的动力学,并与真实蛋白质进行了比较。我们的数据突出了非谐跃迁温度和波动幅度对能量分辨率的依赖性,我们用蛋白质-水合作用能量景观的双位点模型对其进行了定量解释。实验数据强烈表明,蛋白质动力学转变不是简单的分辨率效应,而是由于真正的物理效应。为蛋白质动力学转变获得的激活势垒和自由能值使我们能够与超冷受限水中的双阱相互作用势能建立联系,该势能用于解释低密度→高密度液-液相转变。

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