Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata, West Bengal, India.
Genomics Proteomics Bioinformatics. 2012 Aug;10(4):208-16. doi: 10.1016/j.gpb.2012.07.002. Epub 2012 Jul 25.
Amyloid precursor protein intracellular domain (AICD) is one of the potential candidates in deciphering the complexity of Alzheimer's disease. It plays important roles in determining cell fate and neurodegeneration through its interactions with several adaptors. The presence or absence of phosphorylation at specific sites determines the choice of partners. In this study, we identified 20 novel AICD-interacting proteins by in vitro pull down experiments followed by 2D gel electrophoresis and MALDI-MS analysis. The identified proteins can be grouped into different functional classes including molecular chaperones, structural proteins, signaling and transport molecules, adaptors, motor proteins and apoptosis determinants. Interactions of nine proteins were further validated either by colocalization using confocal imaging or by co-immunoprecipitation followed by immunoblotting. The cellular functions of most of the proteins can be correlated with AD. Hence, illustration of their interactions with AICD may shed some light on the disease pathophysiology.
淀粉样前体蛋白细胞内结构域(AICD)是解析阿尔茨海默病复杂性的潜在候选蛋白之一。它通过与几种衔接蛋白相互作用,在决定细胞命运和神经退行性变方面发挥着重要作用。特定位点磷酸化的存在或缺失决定了伴侣的选择。在这项研究中,我们通过体外下拉实验,随后进行二维凝胶电泳和 MALDI-MS 分析,鉴定了 20 种新型的 AICD 相互作用蛋白。鉴定的蛋白可以分为不同的功能类别,包括分子伴侣、结构蛋白、信号和运输分子、衔接蛋白、动力蛋白和凋亡决定因子。通过共聚焦成像进行共定位或通过共免疫沉淀和免疫印迹进一步验证了 9 种蛋白的相互作用。这些蛋白的大多数细胞功能都与 AD 相关。因此,它们与 AICD 的相互作用的阐明可能有助于阐明疾病的病理生理学。