Howard Hughes Medical Institute, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.
Cell Res. 2012 Dec;22(12):1640-9. doi: 10.1038/cr.2012.160. Epub 2012 Nov 27.
The methylation state of the paternal genome is rapidly reprogrammed shortly after fertilization. Recent studies have revealed that loss of 5-methylcytosine (5mC) in zygotes correlates with appearance of 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC). This process is mediated by Tet3 and the 5mC oxidation products generated in zygotes are gradually lost during preimplantation development through a replication-dependent dilution process. Despite these findings, the biological significance of Tet3-mediated oxidation of 5mC to 5hmC/5fC/5caC in zygotes is unknown. DNA methylation plays an important role in silencing gene expression including the repression of transposable elements (TEs). Given that the activation of TEs during preimplantation development correlates with loss of DNA methylation, it is believed that paternal DNA demethylation may have an important role in TE activation. Here we examined this hypothesis and found that Tet3-mediated 5mC oxidation does not have a significant contribution to TE activation. We show that the expression of LINE-1 (long interspersed nucleotide element 1) and ERVL (endogenous retroviruses class III) are activated from both paternal and maternal genomes in zygotes. Inhibition of 5mC oxidation by siRNA-mediated depletion of Tet3 affected neither TE activation, nor global transcription in zygotes. Thus, our study provides the first evidence demonstrating that activation of both TEs and global transcription in zygotes are independent of Tet3-mediated 5mC oxidation.
父本基因组的甲基化状态在受精后不久就会迅速重新编程。最近的研究表明,受精卵中 5-甲基胞嘧啶(5mC)的丢失与 5-羟甲基胞嘧啶(5hmC)、5-甲酰胞嘧啶(5fC)和 5-羧基胞嘧啶(5caC)的出现相关。这个过程由 Tet3 介导,并且在受精卵中产生的 5mC 氧化产物在胚胎植入前发育过程中通过复制依赖性稀释过程逐渐丢失。尽管有这些发现,但 Tet3 介导的 5mC 氧化为 5hmC/5fC/5caC 在受精卵中的生物学意义尚不清楚。DNA 甲基化在沉默基因表达中起着重要作用,包括对转座元件(TEs)的抑制。鉴于胚胎植入前发育过程中 TEs 的激活与 DNA 甲基化的丢失相关,因此认为父本 DNA 去甲基化可能在 TEs 的激活中起着重要作用。在这里,我们检验了这一假说,并发现 Tet3 介导的 5mC 氧化对 TE 的激活没有显著贡献。我们表明,LINE-1(长散布核元件 1)和 ERVL(内源性逆转录病毒类 III)的表达在受精卵中从父本和母本基因组中都被激活。通过 siRNA 介导的 Tet3 耗竭抑制 5mC 氧化既不影响 TE 的激活,也不影响受精卵中的全局转录。因此,我们的研究首次提供了证据表明,TE 的激活和受精卵中的全局转录与 Tet3 介导的 5mC 氧化无关。