Zhang Wenhui, Oliver Allen G, Vu Henry M, Duman John G, Serianni Anthony S
Department of Chemistry and Biochemistry, University of Notre Dame, IN 46556-5670, USA.
Acta Crystallogr C. 2012 Dec;68(Pt 12):o502-6. doi: 10.1107/S0108270112046689. Epub 2012 Nov 29.
Methyl β-D-mannopyranosyl-(1→4)-β-D-xylopyranoside, C(12)H(22)O(10), (I), crystallizes as colorless needles from water, with two crystallographically independent molecules, (IA) and (IB), comprising the asymmetric unit. The internal glycosidic linkage conformation in molecule (IA) is characterized by a ϕ' torsion angle (O5'(Man)-C1'(Man)-O1'(Man)-C4(Xyl); Man is mannose and Xyl is xylose) of -88.38 (17)° and a ψ' torsion angle (C1'(Man)-O1'(Man)-C4(Xyl)-C5(Xyl)) of -149.22 (15)°, whereas the corresponding torsion angles in molecule (IB) are -89.82 (17) and -159.98 (14)°, respectively. Ring atom numbering conforms to the convention in which C1 denotes the anomeric C atom, and C5 and C6 denote the hydroxymethyl (-CH(2)OH) C atom in the β-Xylp and β-Manp residues, respectively. By comparison, the internal glycosidic linkage in the major disorder component of the structurally related disaccharide, methyl β-D-galactopyranosyl-(1→4)-β-D-xylopyranoside), (II) [Zhang, Oliver & Serriani (2012). Acta Cryst. C68, o7-o11], is characterized by ϕ' = -85.7 (6)° and ψ' = -141.6 (8)°. Inter-residue hydrogen bonding is observed between atoms O3(Xyl) and O5'(Man) in both (IA) and (IB) [O3(Xyl)...O5'(Man) internuclear distances = 2.7268 (16) and 2.6920 (17) Å, respectively], analogous to the inter-residue hydrogen bond detected between atoms O3(Xyl) and O5'(Gal) in (II). Exocyclic hydroxymethyl group conformation in the β-Manp residue of (IA) is gauche-gauche, whereas that in the β-Manp residue of (IB) is gauche-trans.
β -D-吡喃甘露糖基-(1→4)-β -D-吡喃木糖苷,C(12)H(22)O(10),(I),从水中结晶为无色针状晶体,不对称单元包含两个晶体学独立的分子,(IA)和(IB)。分子(IA)中的内糖苷键构象由ϕ'扭转角(O5'(甘露糖)-C1'(甘露糖)-O1'(甘露糖)-C4(木糖);甘露糖用Man表示,木糖用Xyl表示)为-88.38 (17)°和ψ'扭转角(C1'(甘露糖)-O1'(甘露糖)-C4(木糖)-C5(木糖))为-149.22 (15)°表征,而分子(IB)中的相应扭转角分别为-89.82 (17)°和-159.98 (14)°。环原子编号符合C1表示异头C原子,C5和C6分别表示β -木糖基和β -甘露糖基残基中的羟甲基(-CH(2)OH)C原子的惯例。相比之下,结构相关的二糖β -D-吡喃半乳糖基-(1→4)-β -D-吡喃木糖苷(II)[Zhang, Oliver & Serriani (2012). Acta Cryst. C68, o7 - o11]的主要无序成分中的内糖苷键,其特征为ϕ' = -85.7 (6)°和ψ' = -141.6 (8)°。在(IA)和(IB)中均观察到O3(木糖)和O5'(甘露糖)原子之间的残基间氢键[O3(木糖)...O5'(甘露糖)核间距分别为2.7268 (16) Å和2.6920 (17) Å],类似于在(II)中检测到的O3(木糖)和O5'(半乳糖)原子之间的残基间氢键。(IA)的β -甘露糖基残基中的环外羟甲基构象为邻位-邻位,而(IB)的β -甘露糖基残基中的环外羟甲基构象为邻位-反式。