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分子系统发育分析推断离褶伞属中被隔离担子果的多个起源。

Multiple origins of sequestrate basidiomes within Entoloma inferred from molecular phylogenetic analyses.

机构信息

Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha, Kashiwa, Chiba 277-8563, Japan.

出版信息

Fungal Biol. 2012 Dec;116(12):1250-62. doi: 10.1016/j.funbio.2012.09.006. Epub 2012 Oct 22.

Abstract

The genus Entoloma comprises diverse trophic modes and basidiome morphologies. Although Entoloma includes some sequestrate species, their origins are not clearly understood in relation to phylogenetic position and trophic status. In this study, we collected 34 sequestrate Entoloma specimens in Japan over a 9-y period. Their identities and phylogenetic positions were determined by molecular analyses using three nuclear loci [internal transcribed spacer (ITS) and large subunit (LSU) regions of rDNA and RNA polymerase II second LSU (rpb2) gene]. Based on species delimitation of 97 % sequence matches in the ITS region, which is a suitable region for species-level identification of higher fungi, we identified four sequestrate Entoloma species. Molecular phylogenetic analyses that included all related sequences in the International Nucleotide Sequence Database revealed that the four sequestrate Entoloma species belonged to two major phylogroups. One of the phylogroups was Inocephalus-Cyanula, which is composed only of saprotrophic species. Three of the Japanese sequestrate species, as well as three previously known sequestrate species from other regions, fell into at least two independent clades in this phylogroup, indicating multiple origins of sequestrate forms within this saprotrophic lineage. Another phylogroup, Rhodopolioid, was also shown to include a sequestrate species for the first time. Because the Rhodopolioid phylogroup is composed exclusively of mycorrhizal species (ectomycorrhizal and tuberculate mycorrhizal species), the sequestrate form may also have evolved from a mycorrhizal ancestor. Our results suggest that sequestrate basidiomes have evolved multiple times, irrespective of their trophic status in Entoloma. Finally, based on molecular and morphological characteristics, here we describe two new sequestrate Entoloma species, i.e., Entoloma prismaticum Sasaki, Kinoshita et Nara, sp. nov. and Entoloma hypogaeum Sasaki, Kinoshita et Nara, sp. nov.

摘要

块菌属包含多种营养方式和担子果形态。虽然块菌属包括一些隔离种,但它们的起源与系统发育位置和营养状态有关,目前还不清楚。本研究在日本收集了 34 个隔离块菌标本,历时 9 年。通过对三个核基因座(rDNA 内转录间隔区和大亚基区[ITS]和 RNA 聚合酶 II 第二大亚基区[rpb2]基因)的分子分析,确定了它们的身份和系统发育位置。基于 ITS 区 97%序列匹配的种间划分,这是一个适合高等真菌种间鉴定的合适区域,我们鉴定出了 4 个隔离块菌种。包括国际核苷酸序列数据库中所有相关序列的分子系统发育分析表明,这 4 个隔离块菌种属于两个主要的进化枝。其中一个进化枝是 Inocephalus-Cyanula,它仅由腐生种组成。日本的 3 个隔离种,以及其他地区已知的 3 个隔离种,都属于这个进化枝中的至少两个独立分支,表明在这个腐生谱系中,隔离形式有多个起源。另一个进化枝 Rhodopolioid 也首次被证明包含一个隔离种。由于 Rhodopolioid 进化枝仅由菌根种(外生菌根和结节菌根种)组成,隔离形式也可能从菌根祖先进化而来。我们的结果表明,无论块菌属的营养方式如何,隔离担子果已经进化了多次。最后,根据分子和形态特征,我们在这里描述了两个新的隔离块菌种,即 Entoloma prismaticum Sasaki, Kinoshita et Nara, sp. nov. 和 Entoloma hypogaeum Sasaki, Kinoshita et Nara, sp. nov.

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