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甲醇、二甲亚砜和氯仿中扁桃酸甲酯的比较 VCD 研究:显式和隐式溶剂化模型。

A comparative VCD study of methyl mandelate in methanol, dimethyl sulfoxide, and chloroform: explicit and implicit solvation models.

机构信息

Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada T6G 2G2.

出版信息

Phys Chem Chem Phys. 2013 Feb 7;15(5):1655-65. doi: 10.1039/c2cp42722b. Epub 2012 Dec 17.

Abstract

Vibrational absorption (VA) and vibrational circular dichroism (VCD) spectra of methyl mandelate, a prototype chiral molecule, in a series of organic solvents, namely methanol (MeOH-d(4)), dimethyl sulfoxide (DMSO-d(6)), and chloroform (CDCl(3)), have been measured in the finger print region from 1800 to 1150 cm(-1). Implicit solvation models in the form of polarizable continuum model and explicit solvation models have been employed independently and simultaneously. The goal is to evaluate their efficiencies in dealing with solvent effects in each solution and to establish a general strategy to adequately account for effects of solvents. Molecular dynamics (MD) simulation and radial distribution function analysis have been performed to aid the construction of the explicit solvation models. Initial geometry searches have been carried out at the B3LYP/6-31G(d) level for the methyl mandelate monomer and its explicit 1 : 1 and 1 : 2 solute-solvent hydrogen-bonded complexes. B3LYP/cc-pVTZ has been used for all the final geometry optimizations, the vibrational frequency, VA and VCD intensity, and optical rotation dispersion (ORD) calculations. The results show that inclusion of solvent explicitly and implicitly at the same time has significant impacts on the appearance of the VA and VCD spectra, and is crucial for reliable spectral assignments when solvents are capable of hydrogen-bonding interactions with solutes. When no strong solvent-solute hydrogen-bonding interactions in the case of chloroform are expected, the gas phase monomer model is adequate for spectral interpretation, while inclusion of implicit solvation improves the frequency agreement with experiment. ORD spectra of methyl mandelate in the aforementioned solvents at different concentrations under 5 excitation wavelengths have also been measured. The comparison between the calculated and the experimental ORD spectra supports the conclusions drawn from the VA and VCD investigations.

摘要

甲氧基扁桃酸甲酯是一种手性分子的原型化合物,我们在指纹区(1800 到 1150cm(-1))测量了其在一系列有机溶剂中的振动吸收(VA)和振动圆二色性(VCD)谱,这些有机溶剂包括甲醇(MeOH-d(4))、二甲亚砜(DMSO-d(6))和氯仿(CDCl(3))。我们分别独立地和同时采用了可极化连续介质模型和显式溶剂化模型来进行计算。我们的目标是评估它们在处理每种溶液中溶剂效应方面的效率,并建立一种普遍适用的策略来充分考虑溶剂的影响。我们进行了分子动力学(MD)模拟和径向分布函数分析,以辅助构建显式溶剂化模型。我们对甲氧基扁桃酸甲酯单体及其显式的 1:1 和 1:2 溶质-溶剂氢键复合物进行了初始几何搜索,搜索时采用的是 B3LYP/6-31G(d)水平。所有最终的几何优化、振动频率、VA 和 VCD 强度以及旋光色散(ORD)计算都采用了 B3LYP/cc-pVTZ。结果表明,同时显式和隐式地包含溶剂会对 VA 和 VCD 光谱的外观产生显著影响,而且当溶剂能够与溶质发生氢键相互作用时,这对于可靠的光谱分配至关重要。当预期氯仿中没有强的溶剂-溶质氢键相互作用时,气相单体模型足以进行光谱解释,而包含隐式溶剂化可以提高与实验的频率一致性。我们还在 5 个激发波长下,测量了甲氧基扁桃酸甲酯在上述溶剂中的不同浓度下的 ORD 光谱。计算出的 ORD 光谱与实验结果的比较支持了从 VA 和 VCD 研究中得出的结论。

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