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洲际尘埃中的微生物搭便车者:在乍得搭顺风车。

Microbial hitchhikers on intercontinental dust: catching a lift in Chad.

机构信息

Université de Genève, Sciences III, Genève 4, Switzerland.

出版信息

ISME J. 2013 Apr;7(4):850-67. doi: 10.1038/ismej.2012.152. Epub 2012 Dec 20.

Abstract

Ancient mariners knew that dust whipped up from deserts by strong winds travelled long distances, including over oceans. Satellite remote sensing revealed major dust sources across the Sahara. Indeed, the Bodélé Depression in the Republic of Chad has been called the dustiest place on earth. We analysed desert sand from various locations in Chad and dust that had blown to the Cape Verde Islands. High throughput sequencing techniques combined with classical microbiological methods showed that the samples contained a large variety of microbes well adapted to the harsh desert conditions. The most abundant bacterial groupings in four different phyla included: (a) Firmicutes-Bacillaceae, (b) Actinobacteria-Geodermatophilaceae, Nocardiodaceae and Solirubrobacteraceae, (c) Proteobacteria-Oxalobacteraceae, Rhizobiales and Sphingomonadaceae, and (d) Bacteroidetes-Cytophagaceae. Ascomycota was the overwhelmingly dominant fungal group followed by Basidiomycota and traces of Chytridiomycota, Microsporidia and Glomeromycota. Two freshwater algae (Trebouxiophyceae) were isolated. Most predominant taxa are widely distributed land inhabitants that are common in soil and on the surfaces of plants. Examples include Bradyrhizobium spp. that nodulate and fix nitrogen in Acacia species, the predominant trees of the Sahara as well as Herbaspirillum (Oxalobacteraceae), a group of chemoorganotrophic free-living soil inhabitants that fix nitrogen in association with Gramineae roots. Few pathogenic strains were found, suggesting that African dust is not a large threat to public health.

摘要

古代水手知道,强风从沙漠扬起的灰尘会飘到很远的地方,包括海洋。卫星遥感揭示了撒哈拉沙漠的主要尘埃源。事实上,乍得共和国的博德莱洼地被称为地球上最尘土飞扬的地方。我们分析了乍得各地的沙漠砂和飘到佛得角群岛的灰尘。高通量测序技术与经典微生物学方法相结合,表明这些样本含有大量适应恶劣沙漠条件的微生物。四个不同门的最丰富的细菌群包括:(a)厚壁菌门-芽孢杆菌科,(b)放线菌-地衣芽孢杆菌科、诺卡氏菌科和 Solirubrobacteraceae,(c)变形菌门-Oxalobacteraceae、根瘤菌目和鞘氨醇单胞菌科,以及(d)拟杆菌门-Cytophagaceae。子囊菌门是压倒性优势的真菌群,其次是担子菌门和痕量的壶菌门、微孢子虫门和球囊菌门。分离出两种淡水藻类(Trebouxiophyceae)。最主要的类群是广泛分布的陆地生物,它们常见于土壤和植物表面。例如,根瘤菌属在金合欢属中结瘤和固氮,金合欢属是撒哈拉沙漠的主要树种,还有 Herbaspirillum(Oxalobacteraceae),一组化能有机营养的自由生活土壤居民,与禾本科植物的根共生固氮。发现的致病菌株很少,这表明非洲尘埃对公众健康没有太大威胁。

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