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基于 Clg2p 基因的半巢式 PCR 快速灵敏检测与玉米叶斑病相关的旋孢腔菌

Rapid and sensitive detection of Curvularia lunata associated with maize leaf spot based on its Clg2p gene using semi-nested PCR.

机构信息

Institute of Plant Pathology and Applied Microbiology, Heilongjiang Bayi Agricultural University, Daqing, China.

出版信息

Lett Appl Microbiol. 2013 Apr;56(4):245-50. doi: 10.1111/lam.12040. Epub 2013 Jan 14.

Abstract

UNLABELLED

Curvularia lunata (Wakker) Boed, the causative agent of Curvularia leaf spot in maize, was determined according to conidiophore and conidium morphology in a previous study. In the current study, a sensitive polymerase chain reaction assay was developed for the detection of C. lunata. Two specific forward (ClgD1/ClgD2) and one reverse primers (ClgD3) were designed based on a Ras-related (Clg2p) gene. Eight C. lunata isolates that represent different virulent strains in maize, six other Curvularia spp., and 22 fungal plant pathogens were used to test the specificity of the primers. PCR amplification using ClgD1/ClgD3 as the first-round primers resulted in an 870-bp band from the C. lunata isolates. The detection sensitivity using ClgD1/ClgD3 was 100 pg of genomic DNA. In the second round of PCR, a 1 : 50 dilution of the first-round PCR products was used as a template with the ClgD2/ClgD3 primer pair, which increased the detection sensitivity to 1 fg. This semi-nested PCR procedure could also be used to detect C. lunata from infected maize leaves. The proposed PCR-based assay may be used for diagnosing and monitoring maize Curvularia leaf spot.

SIGNIFICANCE AND IMPACT OF THE STUDY

The semi-nested PCR assay may provide researchers and laboratory technologists a tool to rapidly detect C. lunata, which causes maize Curvularia leaf spot, compared with histological examination.

摘要

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先前的研究根据分生孢子梗和分生孢子的形态,确定了引起玉米旋孢腔菌叶斑病的旋孢腔菌(Wakker)Boed。在本研究中,开发了一种用于检测旋孢腔菌的敏感聚合酶链反应(PCR)检测方法。根据 Ras 相关基因(Clg2p)设计了两对特异性正向(ClgD1/ClgD2)和一个反向引物(ClgD3)。使用 8 种代表玉米不同毒力株系的旋孢腔菌分离株、6 种其他旋孢腔菌属物种以及 22 种真菌植物病原体来测试引物的特异性。使用 ClgD1/ClgD3 作为第一轮引物的 PCR 扩增从旋孢腔菌分离株中产生了 870-bp 的条带。使用 ClgD1/ClgD3 的检测灵敏度为 100 pg 基因组 DNA。在第二轮 PCR 中,第一轮 PCR 产物的 1 : 50 稀释液用作模板,使用 ClgD2/ClgD3 引物对,将检测灵敏度提高到 1 fg。这种半巢式 PCR 程序也可用于从感染的玉米叶片中检测旋孢腔菌。基于 PCR 的检测方法可用于诊断和监测玉米旋孢腔菌叶斑病。

研究的意义和影响

与组织学检查相比,半巢式 PCR 检测方法可能为研究人员和实验室技术人员提供一种快速检测引起玉米旋孢腔菌叶斑病的旋孢腔菌的工具。

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