Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, ul. Niezapominajek 8, 30-239, Krakow, Poland,
J Mol Model. 2013 Oct;19(10):4155-61. doi: 10.1007/s00894-012-1747-y. Epub 2013 Jan 12.
A theoretical analysis of bacteriochlorophyll a containing its non-native divalent metal ions: Co, Ni, Cu, Zn, Ru, Rh, Pd, and Pt, has been carried out by means of density functional theory (DFT) calculations. The main stress was put on the derivatives with metals, which already found applications as coordination compounds in anti-tumor therapy (Ru, Pt, Pd, and Rh). The idea was to combine their cytotoxic properties with the known suitability of bacteriochlorophylls macrocycle for photodynamic therapy. The geometries of the studied systems are compared and reveal a number of similarities. The cores of the modified bacteriochlorophylls are flat, and the introduced metal ions lie in plane of the macrocycle, showing its large ability to accommodate metal ions of different sizes. However, four metal-nitrogen bonds, linking the central ions with the macrocycle ligand, are not equivalent. Metals are the strongest attached to nitrogens, which come from the pyrrole, which is fused with isocyclic ring. Based on the known spectroscopic data, the absorption properties of the proposed systems are predicted. Finally, it is found that all studied metal-macrocycle adducts are stable in aqueous media. The only exceptions are Mg-BChla (the finding is reflected by experimental facts) and Zn-BChla. The predicted high stability of Ru-, Rh-, Pt- and Pd-bacteriochlorophylls might turn out beneficial for therapeutic purposes.
采用密度泛函理论(DFT)计算方法对含非天然二价金属离子(Co、Ni、Cu、Zn、Ru、Rh、Pd 和 Pt)的细菌叶绿素 a 进行了理论分析。研究重点放在了已经作为抗肿瘤治疗配位化合物(Ru、Pt、Pd 和 Rh)得到应用的金属衍生物上。其想法是将它们的细胞毒性特性与已知的细菌叶绿素大环适用于光动力疗法的特性相结合。所研究系统的几何形状进行了比较,发现了许多相似之处。修饰后的细菌叶绿素的核心是平面的,引入的金属离子位于大环平面内,表明其具有容纳不同大小金属离子的巨大能力。然而,连接中心离子与大环配体的四个金属-氮键并不相等。金属与来自与杂环环稠合的吡咯的氮的结合最强。根据已知的光谱数据,预测了所提出系统的吸收特性。最后发现,所有研究的金属-大环加合物在水介质中都是稳定的。唯一的例外是 Mg-BChla(这一发现反映在实验事实中)和 Zn-BChla。预测 Ru、Rh、Pt 和 Pd 细菌叶绿素具有高稳定性可能对治疗目的有益。