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正常人类成纤维细胞对轻度温度热疗的常见基因表达模式。

Common gene expression patterns responsive to mild temperature hyperthermia in normal human fibroblastic cells.

机构信息

Division of Molecular Genetics Research, Life Science Research Centre, University of Toyama, Japan.

出版信息

Int J Hyperthermia. 2013;29(1):38-50. doi: 10.3109/02656736.2012.753163.

Abstract

PURPOSE

Heat stress induces complex cellular responses, and its detailed molecular mechanisms still remain to be clarified. The objective of this study was to investigate the molecular mechanisms underlying cellular responses to mild hyperthermia (MHT) in normal human fibroblastic (NHF) cells.

MATERIALS AND METHODS

Cells were treated with MHT (41°C, 30 min) and then cultured at 37°C. Gene expression was determined by the GeneChip® system and bioinformatics tools.

RESULTS

Treatment of the NHF cell lines, Hs68 and OUMS-36, with MHT did not affect the cell viability or cell cycle. In contrast, many probe sets were differentially expressed by >1.5-fold in both cell lines after MHT treatment. Of the 1,196 commonly and differentially expressed probe sets analysed by k-means clustering, three gene clusters, Up-I, Down-I and Down-II, were observed. Interestingly, two gene networks were obtained from the up-regulated genes in cluster Up-I. The gene network E contained DDIT3 and HSPA5 and was mainly associated with the biological process of endoplasmic reticulum stress, while the network S contained HBEGF and LIF and was associated with the biological process of cell survival. Eighteen genes were validated by quantitative real-time polymerase chain reaction, consistent with the microarray data, in four kinds of NHF cells.

CONCLUSIONS

Common genes that were differentially expressed and/or acted within a gene network in response to MHT in NHF cells were identified. These findings provide the molecular basis for a further understanding of the mechanisms of the MHT response in NHF cells.

摘要

目的

热应激会引起复杂的细胞反应,其详细的分子机制仍有待阐明。本研究的目的是研究正常人类成纤维细胞(NHF)对轻度热应激(MHT)的细胞反应的分子机制。

材料和方法

用 MHT(41°C,30min)处理细胞,然后在 37°C 下培养。通过 GeneChip®系统和生物信息学工具确定基因表达。

结果

用 MHT 处理 NHF 细胞系 Hs68 和 OUMS-36 并不影响细胞活力或细胞周期。相比之下,MHT 处理后两种细胞系中许多探针集的表达差异超过 1.5 倍。在通过 k-means 聚类分析的 1196 个共同和差异表达的探针集中,观察到三个基因簇,Up-I、Down-I 和 Down-II。有趣的是,从聚类 Up-I 中的上调基因中获得了两个基因网络。基因网络 E 包含 DDIT3 和 HSPA5,主要与内质网应激的生物学过程相关,而网络 S 包含 HBEGF 和 LIF,与细胞存活的生物学过程相关。在四种 NHF 细胞中,通过定量实时聚合酶链反应验证了 18 个基因,与微阵列数据一致。

结论

在 NHF 细胞中,MHT 诱导的共同差异表达基因和/或作用于基因网络的基因被鉴定出来。这些发现为进一步了解 NHF 细胞中 MHT 反应的机制提供了分子基础。

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