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利用“小巧而智能”的文库提高嗜热脂肪芽孢杆菌酯酶对四氢呋喃-3-基乙酸酯的对映选择性。

Use of 'small but smart' libraries to enhance the enantioselectivity of an esterase from Bacillus stearothermophilus towards tetrahydrofuran-3-yl acetate.

机构信息

Department of Biotechnology and Enzyme Catalysis, Institute of Biochemistry, Greifswald University, Greifswald, Germany.

出版信息

FEBS J. 2013 Jul;280(13):3084-93. doi: 10.1111/febs.12137. Epub 2013 Feb 14.

Abstract

Two libraries of simultaneous double mutations in the active site region of an esterase from Bacillus stearothermophilus were constructed to improve the enantioselectivity in the hydrolysis of tetrahydrofuran-3-yl acetate. As screening of large mutant libraries is hampered by the necessity for GC/MS analysis, mutant libraries were designed according to a 'small but smart' concept. The design of focused libraries was based on data derived from a structural alignment of 3317 amino acid sequences of α/β-hydrolase fold enzymes with the bioinformatic tool 3DM. In this way, the number of mutants to be screened was substantially reduced as compared with a standard site-saturation mutagenesis approach. Whereas the wild-type esterase showed only poor enantioselectivity (E = 4.3) in the hydrolysis of (S)-tetrahydrofuran-3-yl acetate, the best variants obtained with this approach showed increased E-values of up to 10.4. Furthermore, some variants with inverted enantiopreference were found.

摘要

构建了嗜热脂肪芽孢杆菌酯酶活性中心区域的同时双突变文库,以提高其对四氢呋喃-3-基乙酸酯水解的对映选择性。由于需要 GC/MS 分析,因此对大型突变文库的筛选受到阻碍,根据“小而精”的概念设计了突变文库。重点文库的设计基于通过结构比对 3317 个 α/β-水解酶折叠酶的氨基酸序列和生物信息学工具 3DM 得出的数据。通过这种方式,与标准的定点饱和诱变方法相比,待筛选的突变体数量大大减少。野生型酯酶在(S)-四氢呋喃-3-基乙酸酯的水解中仅表现出较差的对映选择性(E = 4.3),而通过这种方法获得的最佳变体的 E 值增加到 10.4。此外,还发现了一些对映体偏好反转的变体。

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