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进化模拟。III. 随机性作为机会的生成器。

Simulations in evolution. III. Randomness as a generator of opportunities.

机构信息

Department of Pharmacy, Lausanne University Hospital, BH04-CHUV, Rue du Bugnon 41, CH-1011 Lausanne, Switzerland.

出版信息

Chem Biodivers. 2013 Jan;10(1):62-72. doi: 10.1002/cbdv.201200207.

Abstract

In Neo-Darwinism, variation and natural selection are the two evolutionary mechanisms which propel biological evolution. Our previous reports presented a histogram model to simulate the evolution of populations of individuals classified into bins according to an unspecified, quantifiable phenotypic character, and whose number in each bin changed generation after generation under the influence of fitness, while the total population was maintained constant. The histogram model also allowed Shannon entropy (SE) to be monitored continuously as the information content of the total population decreased or increased. Here, a simple Perl (Practical Extraction and Reporting Language) application was developed to carry out these computations, with the critical feature of an added random factor in the percent of individuals whose offspring moved to a vicinal bin. The results of the simulations demonstrate that the random factor mimicking variation increased considerably the range of values covered by Shannon entropy, especially when the percentage of changed offspring was high. This increase in information content is interpreted as facilitated adaptability of the population.

摘要

在新达尔文主义中,变异和自然选择是推动生物进化的两个进化机制。我们之前的报告提出了一个直方图模型,用于模拟根据未指定的、可量化的表型特征对个体进行分类的群体的进化,在适应度的影响下,每个群体中的个体数量逐代变化,而总群体保持不变。直方图模型还允许连续监测香农熵(SE),因为总群体的信息量减少或增加。在这里,开发了一个简单的 Perl(实用提取和报告语言)应用程序来执行这些计算,其关键特征是在后代中个体的百分比添加了一个随机因素,这些个体的后代转移到相邻的群体。模拟结果表明,模拟变异的随机因素大大增加了香农熵所涵盖的值范围,尤其是当变化后代的百分比较高时。这种信息量的增加被解释为增加了种群的适应性。

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