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斑纹沙鳅(硬骨鱼纲,鲤形目)的线粒体基因组序列

Mitochondrial genome sequence of the Botia superciliaris (Teleostei, Cypriniformes).

作者信息

Yang Zhen-Yu, Liang Hong-Wei, Li Zhong, Wang Xiao-Yang, Zou Gui-Wei

机构信息

Yangtze River Fisheries Research Institute, The Chinese Academy of Fisheries Sciences, Wuhan 430223, PR China.

出版信息

Mitochondrial DNA. 2013 Aug;24(4):347-9. doi: 10.3109/19401736.2012.760553. Epub 2013 Jan 24.

DOI:10.3109/19401736.2012.760553
PMID:23343396
Abstract

The Botia superciliaris is endemic to China and distributed mainly in the upper reaches of the Yangtze River. The complete mitochondrial genome was 16,597 bp in length, which contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 displacement loop (D-loop) locus. Except for the ND6 gene and eight tRNA genes, all other mitochondrial genes were encoded on the heavy strand. The overall nucleotide composition was 31.6% A, 25.5% T, 27.2% C and 15.7% G, with an AT content of 57.1%. The gene composition and the structural arrangement of the B. superciliaris complete mtDNA were identical to most of the other vertebrates. The molecular data here we presented could play a useful role to study the evolutionary relationships and population genetics of Cobitidae fish.

摘要

中华纹胸鮡是中国特有的物种,主要分布于长江上游。其线粒体基因组全长16,597 bp,包含13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和1个位移环(D-loop)区域。除ND6基因和8个tRNA基因外,所有其他线粒体基因均由重链编码。总体核苷酸组成为31.6%A、25.5%T、27.2%C和15.7%G,AT含量为57.1%。中华纹胸鮡完整线粒体DNA的基因组成和结构排列与大多数其他脊椎动物相同。我们在此呈现的分子数据可能对研究鳅科鱼类的进化关系和群体遗传学发挥有益作用。

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引用本文的文献

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Complete mitochondrial genome of (Teleostei: Cypriniformes, Cobitidae) and its phylogenetic position.(硬骨鱼纲:鲤形目,鳅科)的完整线粒体基因组及其系统发育位置。
Mitochondrial DNA B Resour. 2019 Dec 18;5(1):344-345. doi: 10.1080/23802359.2019.1703596.
2
Integrated analysis of RNA-seq and microRNA-seq depicts miRNA-mRNA networks involved in stripe patterns of Botia superciliaris skin.基于 RNA-seq 和 microRNA-seq 的综合分析描绘了参与超银汉鱼皮肤条纹图案的 miRNA-mRNA 网络。
Funct Integr Genomics. 2019 Sep;19(5):827-838. doi: 10.1007/s10142-019-00683-2. Epub 2019 May 20.