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Location, location, location: it's all in the timing for replication origins.
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[Regulation of DNA replication timing].
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Best practices for mapping replication origins in eukaryotic chromosomes.
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Time to be versatile: regulation of the replication timing program in budding yeast.
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Behavior of replication origins in Eukaryota - spatio-temporal dynamics of licensing and firing.
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Origin Firing Regulations to Control Genome Replication Timing.
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CDC16 controls initiation at chromosome replication origins.
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Replication timing regulation of eukaryotic replicons: Rif1 as a global regulator of replication timing.
Trends Genet. 2013 Aug;29(8):449-60. doi: 10.1016/j.tig.2013.05.001. Epub 2013 Jun 25.
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Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae.
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1
Replication program of a single-chromosome budding yeast strain.
Nucleic Acids Res. 2025 Aug 11;53(15). doi: 10.1093/nar/gkaf754.
2
The budding yeast Fkh1 Forkhead associated (FHA) domain promotes a G1-chromatin state and the activity of chromosomal DNA replication origins.
PLoS Genet. 2024 Aug 5;20(8):e1011366. doi: 10.1371/journal.pgen.1011366. eCollection 2024 Aug.
5
MLL3/MLL4 enzymatic activity shapes DNA replication timing.
bioRxiv. 2023 Dec 8:2023.12.07.569680. doi: 10.1101/2023.12.07.569680.
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Dbf4 Zn-Finger Motif Is Specifically Required for Stimulation of Ctf19-Activated Origins in .
Genes (Basel). 2022 Nov 24;13(12):2202. doi: 10.3390/genes13122202.
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Rpd3 regulates single-copy origins independently of the rDNA array by opposing Fkh1-mediated origin stimulation.
Proc Natl Acad Sci U S A. 2022 Oct 4;119(40):e2212134119. doi: 10.1073/pnas.2212134119. Epub 2022 Sep 26.
8
LSD1 is required for euchromatic origin firing and replication timing.
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Cell-Cycle-Dependent Chromatin Dynamics at Replication Origins.
Genes (Basel). 2021 Dec 16;12(12):1998. doi: 10.3390/genes12121998.

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2
Rif1 regulates the replication timing domains on the human genome.
EMBO J. 2012 Sep 12;31(18):3667-77. doi: 10.1038/emboj.2012.180. Epub 2012 Jul 31.
3
Mouse Rif1 is a key regulator of the replication-timing programme in mammalian cells.
EMBO J. 2012 Sep 12;31(18):3678-90. doi: 10.1038/emboj.2012.214. Epub 2012 Jul 31.
4
Separation of DNA replication from the assembly of break-competent meiotic chromosomes.
PLoS Genet. 2012;8(5):e1002643. doi: 10.1371/journal.pgen.1002643. Epub 2012 May 17.
5
Functional centromeres determine the activation time of pericentric origins of DNA replication in Saccharomyces cerevisiae.
PLoS Genet. 2012;8(5):e1002677. doi: 10.1371/journal.pgen.1002677. Epub 2012 May 10.
6
Multiple modes of chromatin remodeling by Forkhead box proteins.
Biochim Biophys Acta. 2012 Jul;1819(7):707-15. doi: 10.1016/j.bbagrm.2012.02.018. Epub 2012 Mar 2.
7
Rif1 is a global regulator of timing of replication origin firing in fission yeast.
Genes Dev. 2012 Jan 15;26(2):137-50. doi: 10.1101/gad.178491.111.
8
Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae.
Cell. 2012 Jan 20;148(1-2):99-111. doi: 10.1016/j.cell.2011.12.012.
9
Origin association of Sld3, Sld7, and Cdc45 proteins is a key step for determination of origin-firing timing.
Curr Biol. 2011 Dec 20;21(24):2055-63. doi: 10.1016/j.cub.2011.11.038. Epub 2011 Dec 8.
10
Genomic instability: close-up on cancer copy number alterations.
Nat Rev Genet. 2011 Nov 29;13(1):5. doi: 10.1038/nrg3133.

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