Martin-Luther University Halle-Wittenberg, Institute of Biochemistry and Biotechnology, Kurt-Mothes Str 3, 06120 Halle, Germany.
FEBS Lett. 2013 Mar 18;587(6):737-42. doi: 10.1016/j.febslet.2013.01.056. Epub 2013 Feb 8.
Unfolding by chemical denaturants and the linear extrapolation method are widely used to determine the free energy of proteins. Ribonuclease 3 from bullfrog shows an extraordinary behavior in guanidinium hydrochloride in comparison to its homologues ribonuclease A and onconase with a high transition midpoint of denaturation but an apparently low cooperativity. The analysis of the interdependence of thermal, urea-, and guanidine hydrochloride-induced unfolding revealed that whereas addition of urea resulted in the expected destabilization of all three proteins, guanidine hydrochloride acted diversely: in contrast to ribonuclease A and onconase, both of which were destabilized as expected, low concentrations of guanidine hydrochloride significantly stabilize ribonuclease 3 from bullfrog. This stabilizing effect was endorsed by in silico docking studies.
变性剂展开和直线外推法广泛用于测定蛋白质的自由能。与同系物核糖核酸酶 A 和 Onconase 相比,牛蛙核糖核酸酶 3 在盐酸胍中表现出异常行为,其变性中点较高,但协同性明显较低。热变性、脲变性和盐酸胍变性之间相互关系的分析表明,尽管添加脲导致所有三种蛋白质的预期失稳,但盐酸胍的作用方式不同:与核糖核酸酶 A 和 Onconase 不同,它们都如预期的那样失稳,盐酸胍的低浓度显著稳定牛蛙核糖核酸酶 3。计算机对接研究支持了这种稳定作用。