从印度阿萨姆邦杰莱基原油污染土壤中分离出的铜绿假单胞菌菌株N002的基因组序列草图
Draft Genome Sequence of Pseudomonas aeruginosa Strain N002, Isolated from Crude Oil-Contaminated Soil from Geleky, Assam, India.
作者信息
Roy Abhjit Sarma, Baruah Reshita, Gogoi Dhrubajyoti, Borah Maina, Singh Anil Kumar, Deka Boruah Hari Prasanna
机构信息
Department of Biotechnology, Council of Scientific and Industrial Research (CSIR)-North East Institute of Science and Technology, Jorhat, Assam, India.
出版信息
Genome Announc. 2013 Jan;1(1). doi: 10.1128/genomeA.00104-12. Epub 2013 Feb 7.
Abstract
Here, we report the draft genome sequence of crude oil-degrading Pseudomonas aeruginosa strain N002, isolated from a crude oil-polluted soil sample from Geleky, Assam, India. Multiple genes potentially involved in crude oil degradation were identified.
摘要
在此，我们报告了从印度阿萨姆邦格莱基的一个原油污染土壤样本中分离出的原油降解铜绿假单胞菌菌株N002的基因组序列草图。鉴定出了多个可能参与原油降解的基因。
相似文献
1
Draft Genome Sequence of Pseudomonas aeruginosa Strain N002, Isolated from Crude Oil-Contaminated Soil from Geleky, Assam, India.
Genome Announc. 2013 Jan;1(1). doi: 10.1128/genomeA.00104-12. Epub 2013 Feb 7.
2
Complete genome sequence analysis of Pseudomonas aeruginosa N002 reveals its genetic adaptation for crude oil degradation.
Genomics. 2015 Mar;105(3):182-90. doi: 10.1016/j.ygeno.2014.12.006. Epub 2014 Dec 26.
3
Draft Genome Sequence of Hydrocarbon-Degrading Staphylococcus saprophyticus Strain CNV2, Isolated from Crude Oil-Contaminated Soil from the Noonmati Oil Refinery, Guwahati, Assam, India.
Genome Announc. 2016 May 12;4(3):e00370-16. doi: 10.1128/genomeA.00370-16.
4
Draft Genome Sequence of Hydrocarbon-Degrading Enterobacter cloacae Strain S1:CND1, Isolated from Crude Oil-Contaminated Soil from the Noonmati Oil Refinery, Guwahati, Assam, India.
Genome Announc. 2016 May 12;4(3):e00367-16. doi: 10.1128/genomeA.00367-16.
5
Genome Sequence of Hydrocarbon-Degrading Cronobacter sp. Strain DJ34 Isolated from Crude Oil-Containing Sludge from the Duliajan Oil Fields, Assam, India.
Genome Announc. 2015 Nov 12;3(6):e01321-15. doi: 10.1128/genomeA.01321-15.
6
Transcriptome analysis of crude oil degrading Pseudomonas aeruginosa strains for identification of potential genes involved in crude oil degradation.
Gene. 2020 Sep 10;755:144909. doi: 10.1016/j.gene.2020.144909. Epub 2020 Jun 19.
7
Phytoremediation of abandoned crude oil contaminated drill sites of Assam with the aid of a hydrocarbon-degrading bacterial formulation.
Int J Phytoremediation. 2014;16(7-12):909-25. doi: 10.1080/15226514.2013.810573.
8
Draft Genome Sequence of the Hydrocarbon-Degrading Bacterium Strain ABC Isolated from Noonmati Refinery, Assam, India.
Genome Announc. 2017 Nov 2;5(44):e01264-17. doi: 10.1128/genomeA.01264-17.
9
Crude petroleum-oil biodegradation efficiency of Bacillus subtilis and Pseudomonas aeruginosa strains isolated from a petroleum-oil contaminated soil from North-East India.
Bioresour Technol. 2007 May;98(7):1339-45. doi: 10.1016/j.biortech.2006.05.032. Epub 2006 Jul 7.
10
Bioremediation: Data on effects .
Data Brief. 2018 May 3;19:101-113. doi: 10.1016/j.dib.2018.04.102. eCollection 2018 Aug.
引用本文的文献
1
In-depth genome and comparative genome analysis of a metal-resistant environmental isolate S-8.
Front Cell Infect Microbiol. 2025 Feb 27;15:1511507. doi: 10.3389/fcimb.2025.1511507. eCollection 2025.
2
First report on in-depth genome and comparative genome analysis of a metal-resistant bacterium S-30, isolated from environmental sample.
Front Microbiol. 2024 Apr 29;15:1351161. doi: 10.3389/fmicb.2024.1351161. eCollection 2024.
3
Catalytic resilience of multicomponent aromatic ring-hydroxylating dioxygenases in Pseudomonas for degradation of polycyclic aromatic hydrocarbons.
World J Microbiol Biotechnol. 2023 Apr 20;39(7):166. doi: 10.1007/s11274-023-03617-0.
4
A Novel Electrophototrophic Bacterium Rhodopseudomonas palustris Strain RP2, Exhibits Hydrocarbonoclastic Potential in Anaerobic Environments.
Front Microbiol. 2016 Jul 12;7:1071. doi: 10.3389/fmicb.2016.01071. eCollection 2016.
本文引用的文献
1
Microarray-based analysis of microbial functional diversity along an oil contamination gradient in oil field.
FEMS Microbiol Ecol. 2009 Nov;70(2):324-33. doi: 10.1111/j.1574-6941.2009.00774.x. Epub 2009 Aug 28.
2
Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment.
FEMS Microbiol Ecol. 2008 Nov;66(2):295-305. doi: 10.1111/j.1574-6941.2008.00589.x. Epub 2008 Sep 18.
3
Risk assessment and remediation suggestion of impacted soil by produced water associated with oil production.
Environ Monit Assess. 2008 Oct;145(1-3):95-102. doi: 10.1007/s10661-007-0018-3. Epub 2007 Dec 20.
4
Effects of oil pollution at Kuwait's greater Al-Burgan oil field on polycyclic aromatic hydrocarbon concentrations in the tissues of the desert lizard Acanthodactylus scutellatus and their ant prey.
Ecotoxicology. 2007 Nov;16(8):551-5. doi: 10.1007/s10646-007-0161-1. Epub 2007 Sep 19.
5
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
6
The microbial community structure in petroleum-contaminated sediments corresponds to geophysical signatures.
Appl Environ Microbiol. 2007 May;73(9):2860-70. doi: 10.1128/AEM.01752-06. Epub 2007 Mar 9.
7
Evidence of hydrocarbon contamination from the Burgan oil field, Kuwait: interpretations from thermal remote sensing data.
J Environ Manage. 2008 Mar;86(4):605-15. doi: 10.1016/j.jenvman.2006.12.028. Epub 2007 Feb 8.
8
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9. doi: 10.1093/nar/gki366.
9
Characterization of biochemical properties and biological activities of biosurfactants produced by Pseudomonas aeruginosa mucoid and non-mucoid strains isolated from hydrocarbon-contaminated soil samples.
Appl Microbiol Biotechnol. 2005 Nov;69(2):192-9. doi: 10.1007/s00253-005-1975-5. Epub 2005 Nov 12.
10
Biodegradation of a crude oil by three microbial consortia of different origins and metabolic capabilities.
J Ind Microbiol Biotechnol. 2002 May;28(5):252-60. doi: 10.1038/sj/jim/7000236.
Zotero 插件