College of Animal Science and Veterinary Medicine, Shenyang Agricultural University, Shenyang 110866, China.
J Dairy Sci. 2013 Jul;96(7):4529-34. doi: 10.3168/jds.2013-6603. Epub 2013 May 16.
MicroRNA are approximately 18- to 22-nucleotide nonprotein coding molecules that play important roles in the regulation of gene expression at the posttranscriptional level. In the present study, we assessed the suitability of 8 noncoding small RNA as normalizers for microRNA (miR) quantitative analysis in milk somatic cells of lactating yaks, including 3 small nuclear RNA (snRNA; RNU1A, RNU5A, and RNU6B), 3 small nucleolar RNA (snoRNA; SNORA73A, Z30, and SNORA74A), 1 rRNA (5S), and 1 transfer RNA (Met-tRNA). The snRNA RNU1A, RNU5A, and SNORA73A were identified as the most stable references in milk somatic cells of lactating yaks. Also, a minimum of 3 reference RNA (RNU1A, RNU5A, and SNORA73A) were required for the normalization of microRNA expression data in milk somatic cells of the lactating yak. We further evaluated the suitability of the combination of RNU1A, RNU5A, and SNORA73A as reference RNA in milk somatic cells of lactating yaks via detecting the relative expression of miR 16b, miR 21-5p, miR 145, and miR 155 as microRNA of putative interest. In comparison to the colostrum period, on the whole, the expressions of the 4 microRNA were found to be upregulated at an early period and, thereafter, a declining pattern was exhibited from early to final periods in all microRNA investigated. Based on the results from this study, we recommend that the combination of RNU1A, RNU5A, and SNORA73A can be used as normalizers for microRNA quantitative analysis in future longitudinal studies on milk somatic cells of lactating yaks in relation to lactation.
miRNA 是大约 18-22 个核苷酸的非蛋白编码分子,在转录后水平上对基因表达的调控起着重要作用。在本研究中,我们评估了 8 种非编码小 RNA 作为泌乳牦牛乳体细胞中 miRNA 定量分析的内参的适用性,包括 3 种小核 RNA(RNU1A、RNU5A 和 RNU6B)、3 种小核仁 RNA(SNORA73A、Z30 和 SNORA74A)、1 种 rRNA(5S)和 1 种转移 RNA(Met-tRNA)。在泌乳牦牛乳体细胞中,snRNA RNU1A、RNU5A 和 SNORA73A 被鉴定为最稳定的参考。此外,在泌乳牦牛乳体细胞中,miRNA 表达数据的归一化至少需要 3 个参考 RNA(RNU1A、RNU5A 和 SNORA73A)。我们通过检测泌乳牦牛乳体细胞中 miR-16b、miR-21-5p、miR-145 和 miR-155 的相对表达,进一步评估了 RNU1A、RNU5A 和 SNORA73A 作为泌乳牦牛乳体细胞内参的适用性。与初乳期相比,整体上,在所研究的所有 miRNA 中,miR-16b、miR-21-5p、miR-145 和 miR-155 的表达在早期上调,然后从早期到末期呈下降趋势。基于本研究的结果,我们建议在未来与泌乳相关的泌乳牦牛乳体细胞的纵向研究中,将 RNU1A、RNU5A 和 SNORA73A 的组合用作 miRNA 定量分析的内参。