Zhang Yunxin
Shanghai Key Laboratory for Contemporary Applied Mathematics, Laboratory of Mathematics for Nonlinear Science, and Centre for Computational Systems Biology, School of Mathematical Sciences, Fudan University, Shanghai 200433, China.
Phys Rev E Stat Nonlin Soft Matter Phys. 2013 May;87(5):052705. doi: 10.1103/PhysRevE.87.052705. Epub 2013 May 10.
The cargo motion in living cells transported by two species of motor protein with different intrinsic directionalities is discussed in this study. Similarly to single motor movement, the cargo steps forward and backward along a microtubule stochastically. Recent experiments found that cargo transportation by two motor species has a memory; it does not change its direction as frequently as expected, which means that its forward and backward step rates depend on its previous motion trajectory. By assuming that the cargo has only the least possible memory, i.e., its step direction depends only on the direction of its last step, two cases of cargo motion are analyzed in detail in this study: (I) cargo motion under constant external load, and (II) cargo motion in one fixed optical trap. Due to the existence of memory, in the first case, the cargo can keep moving in the same direction for a long distance. In the second case, the cargo will oscillate in the trap. The oscillation period decreases and the oscillation amplitude increases with increasing forward step rate of the motor, but both of them decrease with increasing trap stiffness. The most likely location of the cargo, where the probability of finding the oscillating cargo is maximum, may be the same as or may be different from the trap center, which depends on the step rates of the two motor species. Meanwhile, if the motors are robust, i.e., their forward to backward step rate ratios are high, there may be two such most likely locations, located one on each side of the trap center. The probability of finding the cargo in a given location, the probability of the cargo being in forward or backward motion, and various mean first passage times of the cargo to a given location or a given state are also analyzed.
本研究讨论了由两种具有不同固有方向性的驱动蛋白在活细胞中运输货物的运动情况。与单个驱动蛋白的运动类似,货物沿着微管随机地向前和向后移动。最近的实验发现,由两种驱动蛋白进行的货物运输具有记忆性;它不会像预期的那样频繁改变方向,这意味着其向前和向后的步速取决于其先前的运动轨迹。通过假设货物仅具有尽可能少的记忆,即其步向仅取决于其最后一步的方向,本研究详细分析了货物运动的两种情况:(I)在恒定外部负载下的货物运动,以及(II)在一个固定光阱中的货物运动。由于记忆的存在,在第一种情况下,货物可以在同一方向上长时间移动。在第二种情况下,货物将在光阱中振荡。振荡周期随着驱动蛋白向前步速的增加而减小,振荡幅度随着驱动蛋白向前步速的增加而增大,但两者都随着光阱刚度的增加而减小。货物最可能的位置,即找到振荡货物概率最大的位置,可能与光阱中心相同,也可能不同,这取决于两种驱动蛋白的步速。同时,如果驱动蛋白很强健,即它们向前与向后的步速比很高,可能会有两个这样最可能的位置,分别位于光阱中心的两侧。还分析了在给定位置找到货物的概率、货物向前或向后运动的概率,以及货物到达给定位置或给定状态的各种平均首次通过时间。