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利用低替代通量评估古生物多样性。

Assessing paleo-biodiversity using low proxy influx.

机构信息

Centre for Bio-Archaeology and Ecology, Université Montpellier 2, Centre National de la Recherche Scientifique, Montpellier, France.

出版信息

PLoS One. 2013 Jun 11;8(6):e65852. doi: 10.1371/journal.pone.0065852. Print 2013.

Abstract

We developed an algorithm to improve richness assessment based on paleoecological series, considering sample features such as their temporal resolutions or their volumes. Our new method can be applied to both high- and low-count size proxies, i.e. pollen and plant macroremain records, respectively. While pollen generally abounds in sediments, plant macroremains are generally rare, thus leading to difficulties to compute paleo-biodiversity indices. Our approach uses resampled macroremain influxes that enable the computation of the rarefaction index for the low influx records. The raw counts are resampled to a constant resolution and sample volume by interpolating initial sample ages at a constant time interval using the age∼depth model. Then, the contribution of initial counts and volume to each interpolated sample is determined by calculating a proportion matrix that is in turn used to obtain regularly spaced time series of pollen and macroremain influx. We applied this algorithm to sedimentary data from a subalpine lake situated in the European Alps. The reconstructed total floristic richness at the study site increased gradually when both pollen and macroremain records indicated a decrease in relative abundances of shrubs and an increase in trees from 11,000 to 7,000 cal BP. This points to an ecosystem change that favored trees against shrubs, whereas herb abundance remained stable. Since 6,000 cal BP, local richness decreased based on plant macroremains, while pollen-based richness was stable. The reconstructed richness and evenness are interrelated confirming the difficulty to distinguish these two aspects for the studies in paleo-biodiversity. The present study shows that low-influx bio-proxy records (here macroremains) can be used to reconstruct stand diversity and address ecological issues. These developments on macroremain and pollen records may contribute to bridge the gap between paleoecology and biodiversity studies.

摘要

我们开发了一种基于古生态学序列的丰富度评估算法,考虑了样本特征,如时间分辨率或体积。我们的新方法可应用于高计数和低计数大小代理,分别为花粉和植物大遗存记录。虽然花粉通常在沉积物中丰富,但植物大遗存通常很少,因此难以计算古生物多样性指数。我们的方法使用了重采样的大遗存流入量,使低流入记录的稀有化指数的计算成为可能。原始计数通过在恒定时间间隔内使用年龄~深度模型插值初始样本年龄,以恒定分辨率和样本体积进行重采样。然后,通过计算比例矩阵来确定初始计数和体积对每个插值样本的贡献,该比例矩阵反过来用于获得花粉和大遗存流入的规则间隔时间序列。我们将此算法应用于位于欧洲阿尔卑斯山的一个亚高山湖泊的沉积数据。当花粉和大遗存记录都表明灌木的相对丰度下降,而树木的相对丰度从 11000 年到 7000 年 cal BP 增加时,研究地点的总植物区系丰富度逐渐增加。这表明生态系统发生了变化,有利于树木而不利于灌木,而草本植物的丰度保持稳定。自 6000 年 cal BP 以来,基于植物大遗存的局部丰富度下降,而基于花粉的丰富度保持稳定。重建的丰富度和均匀度相互关联,证实了在古生物多样性研究中区分这两个方面的困难。本研究表明,低流入生物代理记录(此处为大遗存)可用于重建林分多样性并解决生态问题。这些关于大遗存和花粉记录的发展可能有助于弥合古生态学和生物多样性研究之间的差距。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ea53/3679118/ebfb5100a875/pone.0065852.g001.jpg

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