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TNFSF13(APRIL)在南非爪蟾(Xenopus laevi)中的分子克隆、表达、生物信息学分析和生物活性:研究免疫性疾病的新模型。

Molecular cloning, expression, bioinformatics analysis, and bioactivity of TNFSF13 (APRIL) in the South African clawed frog (Xenopus laevi): a new model to study immunological diseases.

机构信息

Molecular and Medical Biotechnology and Aquatic Crustacean Diseases, Jiangsu Province Key Laboratory for Life Sciences College, Nanjing Normal University, Nanjing, China.

出版信息

OMICS. 2013 Jul;17(7):384-92. doi: 10.1089/omi.2013.0004.

Abstract

TNFSF13 is one of the tumor necrosis factor (TNF) superfamily members that plays important roles in immune homeostasis and proliferation or apoptosis of certain tumor cell lines. This report describes the development of Xenopus laevis TNFSF13 as a model to study its important role in relation to immunological diseases. In brief, TNFSF13 from Xenopus laevis (designated XlTNFSF13) was first amplified by RT-PCR and rapid amplification of cDNA end (RACE) techniques. Bioinformatics analyses revealed the gene structure, three-dimensional structure, and evolutionary relationships. Real-time quantitative PCR (QPCR) analysis identified the tissue distribution of XlTNFSF13 in the major visceral organs. The recombinant plasmid SUMO-XsTNFSF13 was expressed in E. coli Rosseta (DE3). Subsequently, the recombinant protein purified through Ni-NTA affinity chromatography was analyzed by SDS-PAGE and confirmed by Western blot analysis. Laser scanning confocal microscopy analysis revealed the binding activity of pSUMO-XsTNFSF13 to the surface of B cells. WST-8 assays further indicated that purified XsTNFSF13 could cause the survival/proliferation of B cells. In conclusion, we underscore that as a model organism for human disease, Xenopus laevis has been widely used in molecular biology research. Yet while TNFSF13 research in mammalian, fish (e.g., zebrafish), mouse, and human is widely available, studies in the amphibian species are limited. The latter area of OMICS and integrative biology scholarship is directly informed with the present study, with a view to implications for the future study of human immunological diseases.

摘要

肿瘤坏死因子超家族成员 13(TNFSF13)是肿瘤坏死因子(TNF)超家族成员之一,在免疫稳态和某些肿瘤细胞系的增殖或凋亡中发挥重要作用。本报告描述了非洲爪蟾 TNFSF13 的发展,作为研究其与免疫性疾病相关的重要作用的模型。简而言之,通过 RT-PCR 和快速扩增 cDNA 末端(RACE)技术首次扩增了非洲爪蟾 TNFSF13(命名为 XlTNFSF13)。生物信息学分析揭示了基因结构、三维结构和进化关系。实时定量 PCR(QPCR)分析确定了 XlTNFSF13 在主要内脏器官中的组织分布。SUMO-XsTNFSF13 的重组质粒在 E. coli Rosetta(DE3)中表达。随后,通过 Ni-NTA 亲和层析纯化重组蛋白,并通过 SDS-PAGE 分析和 Western blot 分析进行验证。激光扫描共聚焦显微镜分析显示 pSUMO-XsTNFSF13 与 B 细胞表面的结合活性。WST-8 测定进一步表明,纯化的 XsTNFSF13 可引起 B 细胞的存活/增殖。总之,我们强调,作为人类疾病的模式生物,非洲爪蟾已广泛应用于分子生物学研究。然而,尽管在哺乳动物、鱼类(如斑马鱼)、小鼠和人类中对 TNFSF13 的研究广泛可用,但在两栖动物物种中的研究有限。该领域的 OMICS 和综合生物学研究直接受到本研究的启发,以期对未来人类免疫性疾病的研究产生影响。

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