Malyarchuk Boris, Derenko Miroslava, Mikhailova Ekaterina, Denisova Galina
Institute of Biological Problems of the North, Magadan 685000, Russia.
Parasitol Int. 2014 Feb;63(1):100-7. doi: 10.1016/j.parint.2013.09.012. Epub 2013 Sep 21.
Phylogenetic and statistical analyses of DNA sequences of two genes, cytochrome oxidase subunit 1 (cox 1) of the mitochondrial DNA and 18S subunit of the nuclear ribosomal RNA (18S rRNA), was used to characterize Neoechinorhynchus species from fishes collected in different localities of North-East Asia. It has been found that four species can be clearly recognized using molecular markers-Neoechinorhynchus tumidus, Neoechinorhynchus beringianus, Neoechinorhynchus simansularis and Neoechinorhynchus salmonis. 18S sequences ascribed to Neoechinorhynchus crassus specimens from North-East Asia were identical to those of N. tumidus, but differed substantially from North American N. crassus. We renamed North-East Asian N. crassus specimens to N. sp., although the possibility that they represent a subspecies of N. tumidus cannot be excluded, taking into account a relatively small distance between cox 1 sequences of North-East Asian specimens of N. crassus and N. tumidus. Maximum likelihood, maximum parsimony and Bayesian inference analyses were performed for phylogeny reconstruction. All the phylogenetic trees showed that North-East Asian species of Neoechinorhynchus analyzed in this study represent independent clades, with the only exception of N. tumidus and N. sp. for 18S data. Phylogenetic analysis has shown that the majority of species sampled (N. tumidus+N. sp., N. simansularis and N. beringianus) are probably very closely related, while N. salmonis occupies separate position in the trees, possibly indicating a North American origin of this species.
利用线粒体DNA的细胞色素氧化酶亚基1(cox 1)和核糖体RNA的18S亚基(18S rRNA)这两个基因的DNA序列进行系统发育和统计分析,以鉴定从东北亚不同地区采集的鱼类体内的新棘吻虫属物种。研究发现,使用分子标记可以清晰地识别出四个物种——肿胀新棘吻虫、白令新棘吻虫、似鳗新棘吻虫和鲑新棘吻虫。来自东北亚的厚新棘吻虫标本的18S序列与肿胀新棘吻虫的序列相同,但与北美厚新棘吻虫的序列有很大差异。我们将东北亚的厚新棘吻虫标本重新命名为新棘吻虫属未定种(N. sp.),不过考虑到东北亚厚新棘吻虫标本和肿胀新棘吻虫的cox 1序列之间距离相对较小,也不能排除它们是肿胀新棘吻虫一个亚种的可能性。为了重建系统发育,进行了最大似然法、最大简约法和贝叶斯推断分析。所有系统发育树都表明,本研究中分析的东北亚新棘吻虫物种代表独立的进化枝,18S数据中肿胀新棘吻虫和新棘吻虫属未定种除外。系统发育分析表明,大多数采样物种(肿胀新棘吻虫+新棘吻虫属未定种、似鳗新棘吻虫和白令新棘吻虫)可能密切相关,而鲑新棘吻虫在树中占据单独位置,这可能表明该物种起源于北美。