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双生病毒数据库(GVDB):双生病毒科及其菜豆金色花叶病毒属的首个数据库。

Geminivirus database (GVDB): first database of family Geminiviridae and its genera Begomovirus.

作者信息

Prajapat Rajneesh, Marwal Avinash, Shaikh Zuber, Gaur Rajarshi Kumar

机构信息

Department of Science, Faculty of Arts, Science and Commerce, Mody Institute of Technology and Science, Lakshmangarh, Sikar-332311, Rajasthan, India.

出版信息

Pak J Biol Sci. 2012 Jul 15;15(14):702-6. doi: 10.3923/pjbs.2012.702.706.

Abstract

Geminivirus Database (GVDB) is an online interactive database of Geminiviridae family. GVDB comprises of partial and complete nucleotide sequences along with duly annotated expressed genes of isolated Begomovirus species. The in silico homology modeling, docking and recombination results obtained for different begomoviral sequences are also mentioned. This database is endowed with comprehensive information about Geminivirus members which grounds infection in various plants species in India assorting from crops, ornamentals plants and common weeds. The home page of this database offers various links associated with current research projects and also the publications related to molecular and in silico study of Begomovirus infection. The main feature of GVDB includes flexible database designs based on platform of PHP allows easy retrieval of the information. The database is made available at www.wikigeminivirus.org.

摘要

双生病毒数据库(GVDB)是双生病毒科的一个在线交互式数据库。GVDB包含分离出的菜豆金色花叶病毒属病毒物种的部分和完整核苷酸序列以及经过适当注释的表达基因。还提到了针对不同菜豆金色花叶病毒序列获得的计算机同源建模、对接和重组结果。该数据库拥有关于双生病毒成员的全面信息,这些信息是印度各种植物物种(包括作物、观赏植物和常见杂草)感染的基础。该数据库的主页提供了与当前研究项目相关的各种链接,以及与菜豆金色花叶病毒感染的分子和计算机研究相关的出版物。GVDB的主要特点包括基于PHP平台的灵活数据库设计,便于信息检索。该数据库可在www.wikigeminivirus.org上获取。

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