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终于!HD-GYP磷酸二酯酶的结构奥秘被揭示了。

Finally! The structural secrets of a HD-GYP phosphodiesterase revealed.

作者信息

Wigren Edvard, Liang Zhao-Xun, Römling Ute

机构信息

Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.

出版信息

Mol Microbiol. 2014 Jan;91(1):1-5. doi: 10.1111/mmi.12463. Epub 2013 Dec 1.

Abstract

The major sessility-motility lifestyle change and additional fundamental aspects of bacterial physiology, behaviour and morphology are regulated by the secondary messenger cyclic di-GMP (c-di-GMP). Although the c-di-GMP metabolizing enzymes and many receptors have been readily characterized upon discovery, the HD-GYP domain c-di-GMP phosphodiesterase family remained underinvestigated. In this issue of Molecular Microbiology, Bellini et al. provide an important step towards functional and structural characterization of the previously neglected HD-GYP domain family by resolving the crystal structure of PmGH, a catalytically active family member from the thermophilic bacterium Persephonella marina. The crystal structure revealed a novel tri-nuclear catalytic iron centre involved in c-di-GMP binding and catalysis and provides the structural basis to subsequently characterize in detail the catalytic mechanism of hydrolysis of c-di-GMP to GMP by HD-GYP domains.

摘要

细菌主要的固着-游动生活方式转变以及细菌生理学、行为和形态学的其他基本方面受第二信使环二鸟苷酸(c-di-GMP)调控。尽管c-di-GMP代谢酶和许多受体一经发现便已得到充分表征,但HD-GYP结构域的环二鸟苷酸磷酸二酯酶家族仍未得到充分研究。在本期《分子微生物学》中,贝利尼等人通过解析来自嗜热细菌滨海珀耳塞福涅菌的具有催化活性的家族成员PmGH的晶体结构,在先前被忽视的HD-GYP结构域家族的功能和结构表征方面迈出了重要一步。晶体结构揭示了一个参与c-di-GMP结合和催化的新型三核催化铁中心,并为随后详细表征HD-GYP结构域将c-di-GMP水解为GMP的催化机制提供了结构基础。

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