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丝氨酸蛋白酶抑制剂的构象分析:分子力学计算在烟草甲性信息素(Lasioderma serricorne F.)的立体化学归属中的应用。

Conformational analysis of serricornin: Application of molecular mechanics calculations to stereochemical assignment of serricornin, sex pheromone of cigarette beetle (Lasioderma serricorne F.).

机构信息

Life Science Research Laboratory, Japan Tobacco Inc., 6-2 Umegaoka, Midori-ku, 227, Yokohama, Japan.

出版信息

J Chem Ecol. 1990 Oct;16(10):2877-88. doi: 10.1007/BF00979480.

Abstract

Conformational analysis using molecular mechanics (MM) was performed for a determination of the stereochemistry of serricornin, the sex pheromone of the cigarette beetle (Lasioderma serricorne F.). An exhaustive conformational analysis using MM2 calculations with algorithms for covering torsional energy surfaces of flexible molecules furnishes coordinates and steric energies of all local energy minimum conformers of serricornin, both acyclic and the corresponding cyclic forms. These coordinates gave angles required for the calculation of vicinal H/H coupling constants ((3) J HHs) of each energy minima by Altona's modified Karplus equation. The Boltzmann distributions of all local energy minima were calculated from their steric energies to furnish populations of each energy minimum conformer. Populationweighted averaged(3) J HHs of four enantiomeric pairs, (S (),S (),S ())-, (S (),S (),R ())-, (S (),R (),S ())-, and (R (),S (),S ())-serricornins were calculated from the data above. The observed(3) J HHs of the naturally occurring serricornin, both acyclic and cyclic forms, are fitted best to calcd.(3) J HHs of (4S (), 6S (), 7S ())-acyclic and (3S (), 5S (), 6S ())-cyclic serricornin, respectively, among those of four enantiomeric pairs of serricornin.

摘要

采用分子力学(MM)进行构象分析,以确定烟甲虫(Lasioderma serricorne F.)性信息素丝氨酸的立体化学。通过 MM2 计算的详尽构象分析,使用覆盖柔性分子扭转能面的算法,提供了丝氨酸的非循环和相应环状形式的所有局部能量最小构象的坐标和立体能。这些坐标通过 Altona 修改的 Karplus 方程为每个能量最小的构象计算相邻 H/H 偶合常数((3)JHHs)提供了所需的角度。从它们的立体能计算所有局部能量最小的玻尔兹曼分布,以提供每个能量最小构象的种群。从上述数据计算出四个对映体对(S(),S(),S())-,(S(),S(),R())-,(S(),R(),S())-和(R(),S(),S())-丝氨酸的加权平均(3)JHHs。观察到的非循环和环状形式的天然丝氨酸的(3)JHHs 与(4S(),6S(),7S())-非循环和(3S(),5S(),6S())-环状丝氨酸的计算(3)JHHs 拟合得最好。

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