Corresponding authors: Akitake Mukasa, MD, PhD, Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan.
Neuro Oncol. 2014 Jan;16(1):140-6. doi: 10.1093/neuonc/not144. Epub 2013 Nov 26.
Mutations in H3F3A, which encodes histone H3.3, commonly occur in pediatric glioblastoma. Additionally, H3F3A K27M substitutions occur in gliomas that arise at midline locations (eg, pons, thalamus, spine); moreover, this substitution occurs mainly in tumors in children and adolescents. Here, we sought to determine the association between H3F3A mutations and adult thalamic glioma.
Genomic H3F3A was sequenced from 20 separate thalamic gliomas. Additionally, for 14 of the 20 gliomas, 639 genes--including cancer-related genes and chromatin-modifier genes--were sequenced, and the Infinium HumanMethylation450K BeadChip was used to examine DNA methylation across the genome.
Of the 20 tumors, 18 were high-grade thalamic gliomas, and of these 18, 11 were from patients under 50 years of age (median age, 38 y; range, 17-46), and 7 were from patients over 50 years of age. The H3F3A K27M mutation was present in 10 of the 11 (91%) younger patients and absent from all 7 older patients. Additionally, H3F3A K27M was not detected in the 2 diffuse astrocytomas. Further sequencing revealed recurrent mutations in TP53, ATRX, NF1, and EGFR. Gliomas with H3F3A K27M from pediatric or young adult patients had similar, characteristic DNA methylation profiles. In contrast, thalamic gliomas with wild-type H3F3A had DNA methylation profiles similar to those of hemispheric glioblastomas.
We found that high-grade thalamic gliomas from young adults, like those from children and adolescents, frequently had H3F3A K27M.
H3F3A 基因编码组蛋白 H3.3,其突变常见于儿童脑胶质瘤。此外,H3F3A K27M 取代发生于中线部位(如脑桥、丘脑、脊柱)的胶质瘤;此外,这种取代主要发生于儿童和青少年的肿瘤中。在此,我们试图确定 H3F3A 突变与成人丘脑胶质瘤之间的关联。
从 20 例独立的丘脑胶质瘤中对基因组 H3F3A 进行测序。此外,对 20 例胶质瘤中的 14 例进行了 639 个基因(包括癌症相关基因和染色质修饰基因)的测序,并使用 Infinium HumanMethylation450K BeadChip 检测整个基因组的 DNA 甲基化。
在 20 例肿瘤中,18 例为高级别丘脑胶质瘤,其中 18 例来自 50 岁以下的患者(中位年龄 38 岁;范围,17-46 岁),7 例来自 50 岁以上的患者。11 例(91%)年轻患者中有 10 例存在 H3F3A K27M 突变,而 7 例老年患者中均不存在。此外,在 2 例弥漫性星形细胞瘤中未检测到 H3F3A K27M。进一步测序显示 TP53、ATR、NF1 和 EGFR 存在反复突变。来自儿科或年轻成年患者的 H3F3A K27M 胶质瘤具有相似的特征性 DNA 甲基化谱。相比之下,具有野生型 H3F3A 的丘脑胶质瘤的 DNA 甲基化谱与大脑半球胶质母细胞瘤相似。
我们发现,来自年轻成人的高级别丘脑胶质瘤,与儿童和青少年的肿瘤一样,经常出现 H3F3A K27M。