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用于研究脂质结合/转运蛋白功能的脊椎动物模型:斑马鱼与人之间OSBP相关蛋白的保守性

A vertebrate model for the study of lipid binding/transfer protein function: conservation of OSBP-related proteins between zebrafish and human.

作者信息

Zhou You, Wohlfahrt Gerd, Paavola Jere, Olkkonen Vesa M

机构信息

Minerva Foundation Institute for Medical Research, Helsinki, Finland.

Computer-Aided Drug Design, Orion Pharma, Espoo, Finland.

出版信息

Biochem Biophys Res Commun. 2014 Apr 11;446(3):675-80. doi: 10.1016/j.bbrc.2013.12.002. Epub 2013 Dec 8.

Abstract

Oxysterol-binding protein (OSBP) and OSBP-related (ORP) or OSBP-like (OSBPL) proteins constitute a family of lipid-binding/transfer proteins (LTPs) present in eukaryotes from yeast to man. The mechanisms of ORP function have remained incompletely understood. However, several ORPs are present at membrane contact sites and act as either lipid transporters or sensors that control lipid metabolism, cell signaling, and vesicle transport. Zebrafish, Danio rerio, has gained increasing popularity as a model organism in developmental biology, human disease, toxicology, and drug discovery. However, LTPs in the fish are thus far unexplored. In this article we report a series of bioinformatic analyses showing that the OSBPL gene family is highly conserved between the fish and human. The OSBPL subfamily structure is markedly similar between the two organisms, and all 12 human genes have orthologs, designated osbpl and located on 11 chromosomes in D. rerio. Interestingly, osbpl2 and osbpl3 are present as two closely related homologs (a and b), due to gene duplication events in the teleost lineage. Moreover, the domain structures of the distinct ORP proteins are almost identical between zebrafish and man, and molecular modeling in the present study suggests that ORD liganding by phosphatidylinositol-4-phosphate (PI4P) is a feature conserved between yeast Osh3p, human ORP3, and zebrafish Osbpl3. The present analysis identifies D. rerio as an attractive model to study the functions of ORPs in vertebrate development and metabolism.

摘要

氧化甾醇结合蛋白(OSBP)以及OSBP相关(ORP)或OSBP样(OSBPL)蛋白构成了一类脂质结合/转运蛋白(LTPs)家族,存在于从酵母到人类的真核生物中。ORP的功能机制尚未完全明确。然而,有几种ORP存在于膜接触位点,充当脂质转运体或传感器,控制脂质代谢、细胞信号传导和囊泡运输。斑马鱼(Danio rerio)作为发育生物学、人类疾病、毒理学和药物发现领域的模式生物,越来越受到关注。然而,鱼类中的LTPs至今尚未得到研究。在本文中,我们报告了一系列生物信息学分析,结果表明OSBPL基因家族在鱼类和人类之间高度保守。两种生物的OSBPL亚家族结构明显相似,人类的所有12个基因都有直系同源基因,命名为osbpl,位于斑马鱼的11条染色体上。有趣的是,由于硬骨鱼系中的基因复制事件,osbpl2和osbpl3以两个密切相关的同源基因(a和b)的形式存在。此外,斑马鱼和人类中不同ORP蛋白的结构域结构几乎相同,本研究中的分子建模表明,磷脂酰肌醇-4-磷酸(PI4P)对ORD的配体结合是酵母Osh3p、人类ORP3和斑马鱼Osbpl3之间保守的特征。本分析确定斑马鱼是研究ORP在脊椎动物发育和代谢中功能的一个有吸引力的模型。

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