Turchetto Caroline, Fagundes Nelson J R, Segatto Ana L A, Kuhlemeier Cris, Solís Neffa Viviana G, Speranza Pablo R, Bonatto Sandro L, Freitas Loreta B
Laboratory of Molecular Evolution, Department of Genetics, Universidade Federal do Rio Grande do Sul, PoBox 15053, 91501-970, Porto Alegre, RS, Brazil.
Institute of Plant Sciences, Altenbergrain 21 CH-3013, Bern, Switzerland.
Mol Ecol. 2014 Feb;23(2):374-89. doi: 10.1111/mec.12632.
Understanding the spatiotemporal distribution of genetic variation and the ways in which this distribution is connected to the ecological context of natural populations is fundamental for understanding the nature and mode of intraspecific and, ultimately, interspecific differentiation. The Petunia axillaris complex is endemic to the grasslands of southern South America and includes three subspecies: P. a. axillaris, P. a. parodii and P. a. subandina. These subspecies are traditionally delimited based on both geography and floral morphology, although the latter is highly variable. Here, we determined the patterns of genetic (nuclear and cpDNA), morphological and ecological (bioclimatic) variation of a large number of P. axillaris populations and found that they are mostly coincident with subspecies delimitation. The nuclear data suggest that the subspecies are likely independent evolutionary units, and their morphological differences may be associated with local adaptations to diverse climatic and/or edaphic conditions and population isolation. The demographic dynamics over time estimated by skyline plot analyses showed different patterns for each subspecies in the last 100 000 years, which is compatible with a divergence time between 35 000 and 107 000 years ago between P. a. axillaris and P. a. parodii, as estimated with the IMa program. Coalescent simulation tests using Approximate Bayesian Computation do not support previous suggestions of extensive gene flow between P. a. axillaris and P. a. parodii in their contact zone.
了解遗传变异的时空分布以及这种分布与自然种群生态环境的联系,对于理解种内乃至最终种间分化的本质和模式至关重要。腋花矮牵牛复合体是南美洲南部草原特有的,包括三个亚种:腋花矮牵牛、帕罗迪矮牵牛和亚安第斯矮牵牛。这些亚种传统上是根据地理和花的形态来划分的,尽管后者变化很大。在这里,我们确定了大量腋花矮牵牛种群的遗传(核DNA和叶绿体DNA)、形态和生态(生物气候)变异模式,发现它们大多与亚种划分一致。核数据表明,这些亚种可能是独立的进化单元,它们的形态差异可能与对不同气候和/或土壤条件的局部适应以及种群隔离有关。通过天际线图分析估计的过去10万年中每个亚种的种群动态模式不同,这与使用IMa程序估计的腋花矮牵牛和帕罗迪矮牵牛在35000至107000年前的分化时间相符。使用近似贝叶斯计算的溯祖模拟测试不支持之前关于腋花矮牵牛和帕罗迪矮牵牛在其接触区存在广泛基因流的观点。