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[基因中DNA碱基的不对称分布程度]

[The extent of asymmetric distribution of DNA-bases in genes].

作者信息

Piechocki R, Berg W, Bergmann A

机构信息

Wissenschaftsbereich Genetik der Sektion Biowissenschaften, Martin-Luther-Universitat, Halle (Saale), DDR.

出版信息

Theor Appl Genet. 1977 Nov;49(6):265-71. doi: 10.1007/BF00275131.

Abstract

The correlation between the evolutionary rates of proteins and frequencies of DNA-bases in the first and in the second position of corresponding codons was investigated.Adenine in the first and guanine in the second position showed the strongest positive correlation with evolutionary rate whereas cytosine in the first as well as in the second position showed a strong negative correlation. The correlation can not be explained by a significant change in GC-content but rather by the asymmetric distribution of the base pairs. The extent of pyrimidine/purine asymmetry was assessed quantitatively.Variations in frequencies of bases lead to changed frequencies of neighbouring bases and thus to changed interactions between adjacent bases in the genes. Slowly evolving proteins are coded by genes with a maximum of thermodynamic interactions between the adjacent bases in the codogeneous chain as well as in the complementary chain. The genes for highly evolving proteins are characterized by minima interactions between adjacent bases.The possible relations between asymmetry and mutability of genes are discussed.

摘要

研究了蛋白质进化速率与相应密码子第一位和第二位DNA碱基频率之间的相关性。第一位的腺嘌呤和第二位的鸟嘌呤与进化速率呈现出最强的正相关,而第一位和第二位的胞嘧啶则呈现出强烈的负相关。这种相关性无法用GC含量的显著变化来解释,而更可能是由碱基对的不对称分布导致的。定量评估了嘧啶/嘌呤不对称的程度。碱基频率的变化导致相邻碱基频率的改变,进而导致基因中相邻碱基之间相互作用的改变。缓慢进化的蛋白质由密码链和互补链中相邻碱基之间具有最大热力学相互作用的基因编码。高度进化的蛋白质的基因特征是相邻碱基之间的相互作用最小。讨论了基因不对称性与突变性之间的可能关系。

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