Spiotto Michael T, Pytynia Matthew, Liu Gene-Fu F, Ranck Mark C, Widau Ryan
Department of Radiation and Cellular Oncology, The University of Chicago Chicago, Illinois USA.
J Oral Maxillofac Res. 2013 Apr 1;4(1):e1. doi: 10.5037/jomr.2013.4101.
Cancer is likely caused by alterations in gene structure or expression. Recently, next generation sequencing has documented mutations in 106 head and neck squamous cell cancer genomes, suggesting several new candidate genes. However, it remains difficult to determine which mutations directly contributed to cancer. Here, summarize the animal models which have already validated and may test cancer causing mutations identified by next generation sequencing approaches.
We reviewed the existing literature on genetically engineered mouse models and next generation sequencing (NGS), as it relates to animal models of squamous cell cancers of the head and neck (HNSCC) in PubMed.
NSG has identified an average of 19 to 130 distinct mutations per HNSCC specimen. While many mutations likely had biological significance, it remains unclear which mutations were essential to, or "drive," carcinogenesis. In contrast, "passenger" mutations also exist that provide no selection advantage. The genes identified by NGS included p53, RAS, Human Papillomavirus oncogenes, as well as novel genes such as NOTCH1, DICER and SYNE1,2. Animal models of HNSCC have already validated some of these common gene mutations identified by NGS.
The advent of next generation sequencing will provide new leads to the genetic changes occurring in squamous cell cancers of the head and neck. Animal models will enable us to validate these new leads in order to better elucidate the biology of squamous cell cancers of the head and neck.
癌症可能由基因结构或表达的改变引起。最近,新一代测序技术已记录了106例头颈部鳞状细胞癌基因组中的突变,提示了几个新的候选基因。然而,确定哪些突变直接导致癌症仍然很困难。在此,总结已得到验证且可能用于测试由新一代测序方法鉴定出的致癌突变的动物模型。
我们检索了PubMed上有关基因工程小鼠模型和新一代测序(NGS)的现有文献,这些文献与头颈部鳞状细胞癌(HNSCC)的动物模型相关。
NGS已在每个HNSCC标本中平均鉴定出19至130个不同的突变。虽然许多突变可能具有生物学意义,但仍不清楚哪些突变对致癌作用至关重要或“驱动”致癌作用。相比之下,也存在没有选择优势的“过客”突变。通过NGS鉴定出的基因包括p53、RAS、人乳头瘤病毒致癌基因,以及NOTCH1、DICER和SYNE1、2等新基因。HNSCC的动物模型已经验证了NGS鉴定出的一些常见基因突变。
新一代测序技术的出现将为头颈部鳞状细胞癌发生的基因变化提供新线索。动物模型将使我们能够验证这些新线索,以便更好地阐明头颈部鳞状细胞癌的生物学特性。