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鸡卵清溶菌酶(Hen Egg Gallin,Chicken Ovodefensin)的三维 NMR 结构揭示了 β-防御素折叠的新变体。

Three-dimensional NMR structure of Hen Egg Gallin (Chicken Ovodefensin) reveals a new variation of the β-defensin fold.

机构信息

From Institut National de la Recherche Agronomique (INRA), UR83 Recherches Avicoles, Fonction et Régulation des Protéines de l'œuf, F-37380 Nouzilly, France; Université François Rabelais, UMR 1100, F-37032 Tours, France; INSERM, Centre d'Etude des Pathologies Respiratoires, UMR 1100/EA6305, F-37032 Tours, France.

Centre de Biophysique Moléculaire, CNRS UPR 4301, Université d'Orléans, Rue Charles Sadron, 45071 Orléans Cedex 2, France.

出版信息

J Biol Chem. 2014 Mar 7;289(10):7211-7220. doi: 10.1074/jbc.M113.507046. Epub 2014 Jan 17.

Abstract

Gallin is a 41-residue protein, first identified as a minor component of hen egg white and found to be antimicrobial against Escherichia coli. Gallin may participate in the protection of the embryo during its development in the egg. Its sequence is related to antimicrobial β-defensin peptides. In the present study, gallin was chemically synthesized 1) to further investigate its antimicrobial spectrum and 2) to solve its three-dimensional NMR structure and thus gain insight into structure-function relationships, a prerequisite to understanding its mode(s) of action. Antibacterial assays confirmed that gallin was active against Escherichia coli, but no additional antibacterial activity was observed against the other Gram-positive or Gram-negative bacteria tested. The three-dimensional structure of gallin, which is the first ovodefensin structure to have been solved to date, displays a new five-stranded arrangement. The gallin three-dimensional fold contains the three-stranded antiparallel β-sheet and the disulfide bridge array typical of vertebrate β-defensins. Gallin can therefore be unambiguously classified as a β-defensin. However, an additional short two-stranded β-sheet reveals that gallin and presumably the other ovodefensins form a new structural subfamily of β-defensins. Moreover, gallin and the other ovodefensins calculated by homology modeling exhibit atypical hydrophobic surface properties, compared with the already known vertebrate β-defensins. These specific structural features of gallin might be related to its restricted activity against E. coli and/or to other yet unknown functions. This work provides initial understanding of a critical sequence-structure-function relationship for the ovodefensin family.

摘要

鸽蛋白是一种由 41 个氨基酸组成的蛋白质,最初被鉴定为鸡蛋清中的一种次要成分,并且具有抗大肠杆菌的抗菌活性。鸽蛋白可能参与了胚胎在卵中发育过程中的保护作用。其序列与抗菌β-防御素肽有关。在本研究中,通过化学合成了鸽蛋白 1)以进一步研究其抗菌谱,2)解决其三维 NMR 结构,从而深入了解结构-功能关系,这是理解其作用模式的前提。抗菌测定证实鸽蛋白对大肠杆菌具有活性,但对其他测试的革兰氏阳性或革兰氏阴性细菌没有观察到额外的抗菌活性。鸽蛋白的三维结构是迄今为止第一个解决的卵防御素结构,显示出一种新的五股排列。鸽蛋白的三维折叠包含三股反平行的β-折叠和典型的脊椎动物β-防御素的二硫键阵列。因此,鸽蛋白可以明确地归类为β-防御素。然而,一个额外的短两股β-折叠表明,鸽蛋白和可能的其他卵防御素形成了一个新的β-防御素结构亚家族。此外,通过同源建模计算的鸽蛋白和其他卵防御素与已经已知的脊椎动物β-防御素相比,表现出非典型的疏水性表面特性。鸽蛋白的这些特定结构特征可能与其对大肠杆菌的有限活性有关,或者与其他未知的功能有关。这项工作提供了对卵防御素家族关键序列-结构-功能关系的初步理解。

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