Department of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, United States.
Department of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, United States.
Curr Opin Chem Biol. 2014 Feb;18:70-7. doi: 10.1016/j.cbpa.2014.01.001. Epub 2014 Jan 30.
Glycan microarrays have become indispensable tools for studying protein-glycan interactions. Along with chemo-enzymatic synthesis, glycans isolated from natural sources have played important roles in array development and will continue to be a major source of glycans. N-glycans and O-glycans from glycoproteins, and glycans from glycosphingolipids (GSLs) can be released from corresponding glycoconjugates with relatively mature methods, although isolation of large numbers and quantities of glycans is still very challenging. Glycosylphosphatidylinositol (GPI) anchors and glycosaminoglycans (GAGs) are less represented on current glycan microarrays. Glycan microarray development has been greatly facilitated by bifunctional fluorescent linkers, which can be applied in a 'Shotgun Glycomics' approach to incorporate isolated natural glycans. Glycan presentation on microarrays may affect glycan binding by GBPs, often through multivalent recognition by the GBP.
糖基化芯片已成为研究蛋白-糖基相互作用不可或缺的工具。化学-酶合成与天然来源糖基化的共同作用,在芯片发展中发挥了重要作用,并将继续成为糖基的主要来源。糖蛋白中的 N-糖基和 O-糖基,以及糖鞘脂(GSL)中的聚糖,可以通过相对成熟的方法从相应的糖缀合物中释放出来,尽管大量和大量聚糖的分离仍然极具挑战性。糖基磷脂酰肌醇(GPI)锚和糖胺聚糖(GAG)在当前糖基化芯片中的代表性较少。双功能荧光接头极大地促进了糖基化芯片的发展,可用于“Shotgun Glycomics”方法,以整合分离的天然糖基。糖基在微阵列上的呈现方式可能会影响 GBP 对糖基的结合,通常是通过 GBP 的多价识别。