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将136种致病突变映射到人类DNA聚合酶γ的功能模块中,可为POLG综合征的全谱建立预测性基因型-表型相关性。

Mapping 136 pathogenic mutations into functional modules in human DNA polymerase γ establishes predictive genotype-phenotype correlations for the complete spectrum of POLG syndromes.

作者信息

Farnum Gregory A, Nurminen Anssi, Kaguni Laurie S

机构信息

Department of Biochemistry and Molecular Biology and Center for Mitochondrial Science and Medicine, Michigan State University, East Lansing, MI 48824-1319, USA.

Institute of Biosciences and Medical Technology, University of Tampere, 33014 Tampere, Finland.

出版信息

Biochim Biophys Acta. 2014 Jul;1837(7):1113-21. doi: 10.1016/j.bbabio.2014.01.021. Epub 2014 Feb 7.

Abstract

We establish the genotype-phenotype correlations for the complete spectrum of POLG syndromes by refining our previously described protocol for mapping pathogenic mutations in the human POLG gene to functional clusters in the catalytic core of the mitochondrial replicase, Pol γ (1). We assigned 136 mutations to five clusters and identify segments of primary sequence that can be used to delimit the boundaries of each cluster. We report that compound heterozygotes with two mutations from different clusters manifested more severe, earlier-onset POLG syndromes, whereas two mutations from the same cluster are less common and generally are associated with less severe, later onset POLG syndromes. We also show that specific cluster combinations are more severe than others and have a higher likelihood to manifest at an earlier age. Our clustering method provides a powerful tool to predict the pathogenic potential and predicted disease phenotype of novel variants and mutations in POLG, the most common nuclear gene underlying mitochondrial disorders. We propose that such a prediction tool would be useful for routine diagnostics for mitochondrial disorders. This article is part of a Special Issue entitled: 18th European Bioenergetic Conference.

摘要

我们通过完善之前描述的将人类POLG基因中的致病突变映射到线粒体复制酶Pol γ催化核心功能簇的方案,建立了POLG综合征全谱的基因型-表型相关性。我们将136个突变分配到五个簇,并确定了可用于界定每个簇边界的一级序列片段。我们报告称,来自不同簇的两个突变的复合杂合子表现出更严重、发病更早的POLG综合征,而来自同一簇的两个突变则较不常见,通常与不太严重、发病较晚的POLG综合征相关。我们还表明,特定的簇组合比其他组合更严重,且在更早年龄出现的可能性更高。我们的聚类方法为预测POLG(线粒体疾病最常见的核基因)新变异和突变的致病潜力及预测疾病表型提供了一个强大工具。我们认为这样的预测工具对线粒体疾病的常规诊断将很有用。本文是名为:第18届欧洲生物能量学会议的特刊的一部分。

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本文引用的文献

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Antimutator alleles of yeast DNA polymerase gamma modulate the balance between DNA synthesis and excision.
PLoS One. 2011;6(11):e27847. doi: 10.1371/journal.pone.0027847. Epub 2011 Nov 16.
2
Alpers syndrome: the natural history of a case highlighting neuroimaging, neuropathology, and fat metabolism.
J Child Neurol. 2012 May;27(5):636-40. doi: 10.1177/0883073811423973. Epub 2011 Nov 22.
3
POLG-related disorders: defects of the nuclear and mitochondrial genome interaction.
Neurology. 2011 Nov 15;77(20):1847-52. doi: 10.1212/WNL.0b013e318238863a.
5
Mitochondrial DNA polymerase gamma mutations: an ever expanding molecular and clinical spectrum.
J Med Genet. 2011 Oct;48(10):669-81. doi: 10.1136/jmedgenet-2011-100222. Epub 2011 Aug 31.
7
Mechanisms of mitochondrial diseases.
Ann Med. 2012 Feb;44(1):41-59. doi: 10.3109/07853890.2011.598547. Epub 2011 Aug 2.
8
Relative frequency of known causes of multiple mtDNA deletions: two novel POLG mutations.
Neuromuscul Disord. 2011 Jul;21(7):483-8. doi: 10.1016/j.nmd.2011.03.011. Epub 2011 May 7.
9
Genetic analysis of two Japanese families with progressive external ophthalmoplegia and parkinsonism.
J Neurol. 2011 Jul;258(7):1327-32. doi: 10.1007/s00415-011-5936-x. Epub 2011 Feb 8.
10
Sequence-specific stalling of DNA polymerase γ and the effects of mutations causing progressive ophthalmoplegia.
Hum Mol Genet. 2011 Mar 15;20(6):1212-23. doi: 10.1093/hmg/ddq565. Epub 2011 Jan 12.

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