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基于吡咯烷鎓的离子液体与牛血清白蛋白相互作用的光谱和对接研究。

Spectroscopic and docking studies on the interaction between pyrrolidinium based ionic liquid and bovine serum albumin.

作者信息

Kumari Meena, Maurya Jitendra Kumar, Singh Upendra Kumar, Khan Abbul Bashar, Ali Maroof, Singh Prashant, Patel Rajan

机构信息

Centre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia (A Central University), New Delhi, India.

Department of Chemistry, Jamia Millia Islamia (A Central University), New Delhi, India.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2014 Apr 24;124:349-56. doi: 10.1016/j.saa.2014.01.012. Epub 2014 Jan 18.

Abstract

The interaction of synthesized ionic liquid, 1-butyl-1-methyl-2-oxopyrrolidinium bromide (BMOP) and bovine serum albumin (BSA) was investigated using UV-Vis, FT-IR, steady state and time resolved fluorescence measurements and docking studies. Steady state spectra revealed that BMOP strongly quenched the intrinsic fluorescence of BSA through dynamic quenching mechanism. The corresponding thermodynamic parameters; Gibbs free energy change (ΔG), entropy change (ΔS) and enthalpy change (ΔH) showed that the binding process was spontaneous and entropy driven. It is also indicated that hydrophobic forces play a key role in the binding of BMOP to BSA. The synchronous fluorescence spectroscopy reveals that the conformation of BSA changed in the presence of BMOP. The shift in amide I band of FT-IR spectrum of BSA suggested unfolding of the protein secondary structure upon the addition of BMOP. In addition, the molecular modeling study of BSA-BMOP system shows that BMOP binds with BSA at the interface between two sub domains IIA and IIIA, which is located just above the entrance of the binding pocket of IIA through hydrophobic and hydrogen bond interactions in which hydrophobic interaction are dominated.

摘要

采用紫外可见光谱、傅里叶变换红外光谱、稳态和时间分辨荧光测量以及对接研究等方法,研究了合成离子液体1-丁基-1-甲基-2-氧代吡咯烷溴化物(BMOP)与牛血清白蛋白(BSA)之间的相互作用。稳态光谱表明,BMOP通过动态猝灭机制强烈猝灭了BSA的固有荧光。相应的热力学参数,吉布斯自由能变化(ΔG)、熵变(ΔS)和焓变(ΔH)表明,结合过程是自发的且由熵驱动。这也表明疏水作用力在BMOP与BSA的结合中起关键作用。同步荧光光谱表明,在BMOP存在下BSA的构象发生了变化。BSA的傅里叶变换红外光谱酰胺I带的位移表明,加入BMOP后蛋白质二级结构发生了解折叠。此外,BSA - BMOP体系的分子模拟研究表明,BMOP通过疏水和氢键相互作用(其中疏水相互作用占主导)在两个亚结构域IIA和IIIA之间的界面处与BSA结合,该界面位于IIA结合口袋入口上方。

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