Marine Biotechnology Research Center, Korea Institute of Ocean Science & Technology, 787 Haeanro, Ansan 426-744, Republic of Korea.
Department of Marine Biotechnology, University of Science and Technology, Daejeon 305-333, Republic of Korea.
Int J Syst Evol Microbiol. 2014 Jun;64(Pt 6):2053-2059. doi: 10.1099/ijs.0.061721-0. Epub 2014 Mar 24.
A Gram-reaction-negative, proteorhodopsin-containing, yellow-pigmented, rod-shaped, non-gliding and strictly aerobic bacterium, designated strain YIK12(T), was isolated from tidal flat sediment of Yeongheung Island at the coast of the West Sea of Korea. Cells produced non-diffusible carotenoid pigments, but not flexirubin-type pigment. Phylogenetic analyses based on 16S rRNA gene sequences indicated that the isolate was affiliated to the family Flavobacteriaceae and showed highest similarity to Sediminibacter furfurosus MAOS-86(T) (93.3%). Growth was observed at 24-44 °C (optimum 30 °C), at pH 6.5-8.0 (optimum 7.0) and in the presence of 1.5-7.0% sea salts (optimum 2%). The DNA G+C content was 40.4 mol% and the predominant cellular fatty acids were iso-C(15 : 0), iso-C(15 : 1) G, iso-C(17 : 0) 3-OH, iso-C(16 : 0) 3-OH, anteiso-C(15 : 0) and iso-C(15 : 0) 3-OH. The major respiratory quinone was MK-6. On the basis of data from the present polyphasic taxonomic study, strain YIK12(T) is considered to represent a novel species of a new genus in the family Flavobacteriaceae, for which the name Hoppeia youngheungensis gen. nov., sp. nov. is proposed. The type strain of H. youngheungensis is YIK12(T) ( = KCCM 43023(T) = JCM 19488(T)). Emended descriptions of the genus Sediminibacter and Sediminibacter furfurosus are given.
一株革兰氏反应阴性、含菌视紫红质、黄色素、杆状、非滑行、严格需氧的细菌,被命名为 YIK12(T) 菌株,从韩国西海沿岸永宗岛潮间带沉积物中分离得到。细胞产生非扩散类胡萝卜素色素,但不产生 flexirubin 型色素。基于 16S rRNA 基因序列的系统发育分析表明,该分离物属于黄杆菌科,与 Sediminibacter furfurosus MAOS-86(T)(93.3%)最为相似。在 24-44°C(最佳 30°C)、pH6.5-8.0(最佳 7.0)和 1.5-7.0%海盐(最佳 2%)存在的条件下可以生长。DNA G+C 含量为 40.4 mol%,主要细胞脂肪酸为 iso-C(15:0)、iso-C(15:1) G、iso-C(17:0) 3-OH、iso-C(16:0) 3-OH、anteiso-C(15:0) 和 iso-C(15:0) 3-OH。主要呼吸醌为 MK-6。根据目前多相分类学研究的数据,YIK12(T) 菌株被认为代表了黄杆菌科一个新属的新种,建议将其命名为 Hoppeia youngheungensis gen. nov.,sp. nov.。H. youngheungensis 的模式菌株为 YIK12(T)(=KCCM 43023(T)=JCM 19488(T))。对 Sediminibacter 和 Sediminibacter furfurosus 的属名进行了修订。