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澳大利亚分离的棉铃虫核型多角体病毒基因组序列分析。

Genomic sequence analysis of Helicoverpa armigera nucleopolyhedrovirus isolated from Australia.

出版信息

Arch Virol. 2014 Mar;159(3):595-601.

Abstract

The complete genomic sequence of Helicoverpa armigera nucleopolyhedrovirus from Australia, HearNPV-Au, was determined and analyzed. The HearNPV-Au genome was 130,992 bp in size with a G + C content of 39 mol% and contained 134 predicted open reading frames (ORFs) consisting of more than 150 nucleotides. HearNPV-Au shared 94 ORFs with AcMNPV, HearSNPV-G4 and SeMNPV, and was most closely related to HearSNPV-G4. The nucleotide sequence identity between HearNPV-Au and HearSNPV-G4 genome was 99 %. The major differences were found in homologous regions (hrs) and baculovirus repeat ORFs (bro) genes. Five hrs and two bro genes were identified in the HearNPV-Au genome. All of the 134 ORFs identified in HearNPV-Au were also found in HearSNPV-G4, except the homologue of ORF59 (bro) in HearSNPV-G4. The sequence data strongly suggested that HearNPV-Au and HearSNPV-G4 belong to the same virus species.

摘要

从澳大利亚采集的棉铃虫核型多角体病毒(Helicoverpa armigera nucleopolyhedrovirus)的全基因组序列,即 HearNPV-Au,已被测定和分析。HearNPV-Au 的基因组大小为 130992bp,G+C 含量为 39mol%,包含 134 个预测的开放阅读框(ORFs),长度超过 150 个核苷酸。HearNPV-Au 与 AcMNPV、HearSNPV-G4 和 SeMNPV 共享 94 个 ORF,与 HearSNPV-G4 的亲缘关系最近。HearNPV-Au 与 HearSNPV-G4 基因组的核苷酸序列同一性为 99%。主要差异存在于同源区(hrs)和杆状病毒重复 ORFs(bro)基因中。HearNPV-Au 基因组中鉴定出 5 个 hrs 和 2 个 bro 基因。在 HearNPV-Au 中鉴定出的 134 个 ORF 也存在于 HearSNPV-G4 中,除了 HearSNPV-G4 中 ORF59(bro)的同源物。序列数据强烈表明,HearNPV-Au 和 HearSNPV-G4 属于同一病毒种。

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