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肠外致病性大肠杆菌的大流行谱系。

Pandemic lineages of extraintestinal pathogenic Escherichia coli.

机构信息

Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, CA, USA.

出版信息

Clin Microbiol Infect. 2014 May;20(5):380-90. doi: 10.1111/1469-0691.12646.

DOI:10.1111/1469-0691.12646
PMID:24766445
Abstract

Pathogenic Escherichia coli strains cause a wide variety of intestinal and extraintestinal infections. The widespread geographical clonal dissemination of intestinal pathogenic E. coli strains, such as E. coli O157:H7, is well recognized, and its spread is most often attributed to contaminated food products. On the other hand, the clonal dissemination of extraintestinal pathogenic E. coli (ExPEC) strains is also recognized, but the mechanism of their spread is not well explained. Here, I describe major pandemic clonal lineages of ExPEC based on multilocus sequence typing (MLST), and discuss possible reasons for their global dissemination. These lineages include sequence type (ST)131, ST393, ST69, ST95, and ST73, which are all associated with both community-onset and healthcare-associated infections, in particular urinary tract infections and bloodstream infections. As with many other types of drug-resistant Gram-negative and Gram-positive bacterial infections, drug-resistant ExPEC infections are recognized to be caused by a limited set of clonal lineages. However, reported observations on these major pandemic lineages suggest that the resistance phenotype is not necessarily the determinant of their clonal dissemination. Both epidemiological factors and their intrinsic biological 'fitness' are likely to contribute. An important public health and clinical concern is that pandemicity itself may be a determinant of progressive drug resistance acquisition by clonal lineages. New research is urgently needed to better understand the epidemiological and biological causes of ExPEC pandemicity.

摘要

致病性大肠杆菌菌株可引起多种肠道和肠道外感染。肠致病性大肠杆菌菌株(如大肠杆菌 O157:H7)的广泛地理克隆传播是众所周知的,其传播通常归因于受污染的食品。另一方面,也认识到肠道外致病性大肠杆菌(ExPEC)菌株的克隆传播,但它们传播的机制尚不清楚。在这里,我根据多位点序列分型(MLST)描述了 ExPEC 的主要大流行克隆谱系,并讨论了它们全球传播的可能原因。这些谱系包括与社区获得性和医疗机构获得性感染(尤其是尿路感染和血流感染)相关的序列型(ST)131、ST393、ST69、ST95 和 ST73。与许多其他类型的耐药革兰氏阴性和革兰氏阳性细菌感染一样,耐药性 ExPEC 感染被认为是由有限的一组克隆谱系引起的。然而,对这些主要大流行谱系的报告观察表明,耐药表型不一定是其克隆传播的决定因素。流行病学因素及其内在的生物学“适应性”都可能起到作用。一个重要的公共卫生和临床关注是,大流行本身可能是克隆谱系获得进行性药物耐药性的决定因素。迫切需要新的研究来更好地了解 ExPEC 大流行的流行病学和生物学原因。

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