甲醛降解菌株蒙特利假单胞菌IOFA19的基因组草图
Draft genome of formaldehyde-degrading strain, Pseudomonas monteilii IOFA19.
作者信息
Liu Yang, Chen Xinglin, Blom Jochen, Yi Zhiwei, Wen Jian, Zeng Runying
机构信息
State Key Laboratory Breeding Base of Marine Genetic Resource, Third Institute of Oceanography, SOA, Xiamen 361005, China.
Computational Genomics, Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany.
出版信息
Mar Genomics. 2014 Jun;15:1-2. doi: 10.1016/j.margen.2014.04.005. Epub 2014 May 2.
The draft genome of Pseudomonas monteilii strain IOFA19 isolated from deep-sea sediment of the Indian Ocean was sequenced to gain insights into its efficient metabolic pathway for degrading formaldehyde. The annotated genome of this strain was subjected to comparative analysis with the genomes of existing sequenced P. monteilii strains QM, SB3101, and SB3078. Differences in the overall genomic content were observed, and relative genes that were hypothetically involved in the formaldehyde-degrading mechanism were identified.
对从印度洋深海沉积物中分离出的蒙氏假单胞菌菌株IOFA19的基因组草图进行了测序，以深入了解其高效降解甲醛的代谢途径。将该菌株的注释基因组与现有已测序的蒙氏假单胞菌菌株QM、SB3101和SB3078的基因组进行了比较分析。观察到整体基因组内容存在差异，并鉴定出可能参与甲醛降解机制的相关基因。
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