Department of Microbiology and Immunology, Faculty of Pharmacy, Suez Canal University, Ismailia, Egypt.
J Infect Public Health. 2014 Jul-Aug;7(4):296-307. doi: 10.1016/j.jiph.2014.02.002. Epub 2014 May 5.
The progress in biological technologies has led to rapid accumulation of microbial genomic sequences with a vast number of uncharacterized genes. Proteins encoded by these genes are usually uncharacterized, hypothetical, and/or conserved. In Clostridium tetani (C. tetani), these proteins constitute up to 50% of the expressed proteins. In this regard, understanding the functions and the structures of these proteins is crucially important, particularly in C. tetani, which is a medically important pathogen. Here, we used a variety of bioinformatics tools and databases to analyze 10 hypothetical and conserved proteins in C. tetani. We were able to provide a detailed overview of the functional contributions of some of these proteins in several cellular functions, including (1) evolving antibiotic resistance, (2) interaction with enzymes pathways, and (3) involvement in drug transportation. Among these candidates, we postulated the involvement of one of these hypothetical proteins in the pathogenic activity of tetanus. The structural and functional prediction of these proteins should serve in uncovering and better understanding the function of C. tetani cells to ultimately discover new possible drug targets.
生物技术的进步导致微生物基因组序列的快速积累,其中包含大量未被描述的基因。这些基因编码的蛋白质通常是未知的、假设的和/或保守的。在破伤风梭菌(C. tetani)中,这些蛋白质构成了表达蛋白的 50%。在这方面,理解这些蛋白质的功能和结构至关重要,特别是在破伤风梭菌这种具有医学重要性的病原体中。在这里,我们使用了各种生物信息学工具和数据库来分析破伤风梭菌中的 10 种假设和保守蛋白。我们能够详细概述其中一些蛋白在几种细胞功能中的功能贡献,包括(1)产生抗生素耐药性,(2)与酶途径相互作用,以及(3)参与药物运输。在这些候选蛋白中,我们推测其中一种假设蛋白参与了破伤风的发病机制。这些蛋白的结构和功能预测应该有助于揭示和更好地理解破伤风梭菌细胞的功能,从而最终发现新的可能的药物靶点。