Kalverda Arnout P, Gowdy James, Thompson Gary S, Homans Steve W, Henderson Peter J F, Patching Simon G
School of Molecular and Cellular Biology and Astbury Centre for Structural Molecular Biology and.
Mol Membr Biol. 2014 Jun;31(4):131-40. doi: 10.3109/09687688.2014.911980. Epub 2014 May 7.
Using the sugar transport protein, GalP, from Escherichia coli, which is a homologue of human GLUT transporters, we have overcome the challenges for achieving high-resolution [(15)N-(1)H]- and [(13)C-(1)H]-methyl-TROSY NMR spectra with a 52 kDa membrane protein that putatively has 12 transmembrane-spanning α-helices and used the spectra to detect inhibitor binding. The protein reconstituted in DDM detergent micelles retained structural and functional integrity for at least 48 h at a temperature of 25 °C as demonstrated by circular dichroism spectroscopy and fluorescence measurements of ligand binding, respectively. Selective labelling of tryptophan residues reproducibly gave 12 resolved signals for tryptophan (15)N backbone positions and also resolved signals for (15)N side-chain positions. For improved sensitivity isoleucine, leucine and valine (ILV) methyl-labelled protein was prepared, which produced unexpectedly well resolved [(13)C-(1)H]-methyl-TROSY spectra showing clear signals for the majority of methyl groups. The GalP/GLUT inhibitor forskolin was added to the ILV-labelled sample inducing a pronounced chemical shift change in one Ile residue and more subtle changes in other methyl groups. This work demonstrates that high-resolution TROSY NMR spectra can be achieved with large complex α-helical membrane proteins without the use of elevated temperatures. This is a prerequisite to applying further labelling strategies and NMR experiments for measurement of dynamics, structure elucidation and use of the spectra to screen ligand binding.
我们利用来自大肠杆菌的糖转运蛋白GalP(它是人类GLUT转运蛋白的同源物),克服了对一个推定具有12个跨膜α螺旋的52 kDa膜蛋白进行高分辨率[(15)N-(1)H]-和[(13)C-(1)H]-甲基-TROSY NMR光谱测定的挑战,并利用这些光谱检测抑制剂结合。分别通过圆二色光谱法和配体结合的荧光测量表明,重构于DDM去污剂胶束中的该蛋白在25°C温度下至少48小时保持结构和功能完整性。色氨酸残基的选择性标记可重复性地给出了色氨酸(15)N主链位置的12个分辨信号以及(15)N侧链位置的分辨信号。为提高灵敏度,制备了异亮氨酸、亮氨酸和缬氨酸(ILV)甲基标记的蛋白,其产生了出人意料的分辨率良好的[(13)C-(1)H]-甲基-TROSY光谱,显示出大多数甲基的清晰信号。将GalP/GLUT抑制剂福斯可林添加到ILV标记的样品中,导致一个异亮氨酸残基出现明显的化学位移变化,其他甲基出现更细微的变化。这项工作表明,无需使用高温即可对大型复杂的α螺旋膜蛋白实现高分辨率TROSY NMR光谱测定。这是应用进一步的标记策略和NMR实验来测量动力学、阐明结构以及利用光谱筛选配体结合的先决条件。