Suppr超能文献

免疫性血小板减少症中的血浆微小RNA谱:筛查与验证

[Plasma microRNA profile in immune thrombocytopenia: screening and verification].

作者信息

Sui Tao, Ma Li, Li Xin, Li Qing, Bai Xue, Mu Juan, Zhao Mingfeng

机构信息

Department of Hematology, Tianjin First Center Hospital, Tianjin 300192, China. Email:

Department of Hematology, Tianjin First Center Hospital, Tianjin 300192, China.

出版信息

Zhonghua Yi Xue Za Zhi. 2014 Apr 15;94(14):1083-6.

Abstract

OBJECTIVE

To screen the plasma microRNA (miRNA) profile of immune thrombocytopenia (ITP) patients.

METHODS

Agilent 19.0 miRNA microarray was used to detect the expression profile of miRNA in plasma from 25 ITP patients and 20 healthy controls from June 2012 to September 2013. The software programs of TargetScan and miRanda were used for predicting target genes associated with differential miRNA. Then gene ontology (GO) and pathway analysis were performed to explore the genes and pathways involved in the pathogenesis of ITP. And differential miRNA was validated by real-time quantitative polymerase chain reaction (PCR).

RESULTS

A genome-wide miRNA array revealed 29 differential miRNAs in the plasma samples of ITP patients including 15 up-regulated and 14 down-regulated miRNA. A total of 608 potential genes were predicted by TargetScan and miRanda.GO result showed that there were 475 (78.12%), 491(80.76%) and 533 (87.66%) genes respectively involved in biological process, molecular function and cellular component.Enrichment test showed 9 GO terms had significant difference (P < 0.05). Pathway analysis showed that 157 pathways were associated with 608 genes.Enrichment test showed 25 pathways had significant difference (P < 0.05). As revealed by real-time PCR, the expressions of miRNA4778-5p and miRNA4800-5p became obviously up-regulated while those of miRNA4707-5p, miRNA4721, miRNA3620-3p and miRNA378i decreased (all P < 0.05). The results agreed with those of microarray.

CONCLUSIONS

The plasma differential miRNA profiles are identified in ITP patients. And miRNA is involved in calcium signaling pathway and T cell receptor signaling pathway may be associated with ITP pathogenesis.

摘要

目的

筛选免疫性血小板减少症(ITP)患者的血浆微小RNA(miRNA)谱。

方法

采用安捷伦19.0 miRNA微阵列检测2012年6月至2013年9月期间25例ITP患者和20例健康对照者血浆中miRNA的表达谱。利用TargetScan和miRanda软件程序预测与差异miRNA相关的靶基因。然后进行基因本体(GO)和通路分析,以探索参与ITP发病机制的基因和通路。通过实时定量聚合酶链反应(PCR)验证差异miRNA。

结果

全基因组miRNA阵列显示ITP患者血浆样本中有29种差异miRNA,其中15种上调,14种下调。TargetScan和miRanda共预测出608个潜在基因。GO结果显示,分别有475个(78.12%)、491个(80.76%)和533个(87.66%)基因参与生物过程、分子功能和细胞成分。富集检验显示9个GO术语有显著差异(P<0.05)。通路分析显示157条通路与608个基因相关。富集检验显示25条通路有显著差异(P<0.05)。实时PCR结果显示,miRNA4778-5p和miRNA4800-5p的表达明显上调,而miRNA4707-5p、miRNA4721、miRNA3620-3p和miRNA378i的表达下降(均P<0.05)。结果与微阵列结果一致。

结论

在ITP患者中鉴定出血浆差异miRNA谱。miRNA参与钙信号通路,T细胞受体信号通路可能与ITP发病机制有关。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验