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来自伯克霍尔德氏菌AIU 395的磷酸吡哆醛依赖性L-赖氨酸脱羧酶/氧化酶的特性分析

Characterization of a pyridoxal-5'-phosphate-dependent l-lysine decarboxylase/oxidase from Burkholderia sp. AIU 395.

作者信息

Sugawara Asami, Matsui Daisuke, Takahashi Narumi, Yamada Miwa, Asano Yasuhisa, Isobe Kimiyasu

机构信息

Department of Biological Chemistry and Food Science, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka 020-8550, Japan.

Biotechnology Research Center and Department of Biotechnology, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama 939-0398, Japan; Asano Active Enzyme Molecule Project, ERATO, JST, 5180 Kurokawa, Imizu, Toyama 939-0398, Japan.

出版信息

J Biosci Bioeng. 2014 Nov;118(5):496-501. doi: 10.1016/j.jbiosc.2014.04.013. Epub 2014 May 24.

Abstract

A novel enzyme, which catalyzed decarboxylation of l-lysine into cadaverine with release of carbon dioxide and oxidative deamination of l-lysine into l-2-aminoadipic 5-semialdehyde with release of ammonia and hydrogen peroxide, was found from a newly isolated Burkholderia sp. AIU 395. The enzyme was specific to l-lysine and did not exhibit enzyme activities for other l-amino acids, l-lysine derivatives, d-amino acids, and amines. The apparent Km values for l-lysine in the oxidation and decarboxylation reactions were estimated to be 0.44 mM and 0.84 mM, respectively. The molecular mass was estimated to be 150 kDa, which was composed of two identical subunits with molecular mass of 76.5 kDa. The enzyme contained one mol of pyridoxal 5'-phosphate per subunit as a prosthetic group. The enzyme exhibiting decarboxylase and oxidase activities for l-lysine was first reported here, while the deduced amino acid sequence was homologous to that of putative lysine decarboxylases from the genus Burkholderia.

摘要

从新分离出的伯克霍尔德氏菌属菌株AIU 395中发现了一种新型酶,该酶可催化L-赖氨酸脱羧生成尸胺并释放二氧化碳,还可催化L-赖氨酸氧化脱氨生成L-2-氨基己二酸5-半醛并释放氨和过氧化氢。该酶对L-赖氨酸具有特异性,对其他L-氨基酸、L-赖氨酸衍生物、D-氨基酸和胺类均无酶活性。氧化反应和脱羧反应中L-赖氨酸的表观Km值分别估计为0.44 mM和0.84 mM。分子量估计为150 kDa,由两个分子量为76.5 kDa的相同亚基组成。该酶每个亚基含有1摩尔吡哆醛5'-磷酸作为辅基。本文首次报道了对L-赖氨酸具有脱羧酶和氧化酶活性的酶,而推导的氨基酸序列与伯克霍尔德氏菌属假定的赖氨酸脱羧酶的序列同源。

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