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验证反转录定量 PCR 中用于人正常甲状腺和甲状腺肿组织基因表达标准化的参考基因。

Validation of reference genes for normalization gene expression in reverse transcription quantitative PCR in human normal thyroid and goiter tissue.

机构信息

Programa de Pós Graduação em Medicina: Ciências Médicas, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos 2400, 90035-903 Porto Alegre, RS, Brazil.

Programa de Pós Graduação em Medicina: Ciências Médicas, Universidade Federal do Rio Grande do Sul, Rua Ramiro Barcelos 2400, 90035-903 Porto Alegre, RS, Brazil ; Programa de Pós Graduação em Ciências da Saúde, Universidade Federal de Ciências da Saúde Porto Alegre, Rua Sarmento Leite 245, 90050-170 Porto Alegre, RS, Brazil.

出版信息

Biomed Res Int. 2014;2014:198582. doi: 10.1155/2014/198582. Epub 2014 May 11.

Abstract

Reverse transcription quantitative polymerase chain reaction (RT-qPCR) has been recognized as the most accurate method for quantifying mRNA transcripts, but normalization of samples is a prerequisite for correct data interpretation. So, this study aimed to evaluate the most stable reference gene for RT-qPCR in human normal thyroid and goiter tissues. Beta-actin (ACTB); glyceraldehyde-3-phosphate dehydrogenase (GAPDH); succinate dehydrogenase, subunit A, flavoprotein (Fp) (SDHA); hypoxanthine phosphoribosyltransferase I (HPRTI); tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ); and beta-2-microglobulin (B2M) were evaluated in 14 thyroid tissue samples (7 normal and 7 goiter tissues) by RT-qPCR. The mean Cq and the maximum fold change (MFC) and NormFinder software were used to assess the stability of the genes. As a result, ACTB gene was more stable than GAPDH, SDHA, HPRTI, YWHAZ, and B2M. In conclusion, ACTB could be used to normalize RT-qPCR data in normal thyroid and goiter tissues.

摘要

逆转录定量聚合酶链反应(RT-qPCR)已被认为是定量 mRNA 转录本最准确的方法,但样本的标准化是正确数据解释的前提。因此,本研究旨在评估人正常甲状腺和甲状腺肿组织中 RT-qPCR 最稳定的参考基因。β-肌动蛋白(ACTB);甘油醛-3-磷酸脱氢酶(GAPDH);琥珀酸脱氢酶,亚单位 A,黄素蛋白(Fp)(SDHA);次黄嘌呤磷酸核糖基转移酶 I(HPRTI);酪氨酸 3-单加氧酶/色氨酸 5-单加氧酶激活蛋白,ζ 多肽(YWHAZ);和β-2-微球蛋白(B2M)通过 RT-qPCR 在 14 个甲状腺组织样本(7 个正常和 7 个甲状腺肿组织)中进行评估。使用平均 Cq 和最大倍数变化(MFC)和 NormFinder 软件来评估基因的稳定性。结果表明,ACTB 基因比 GAPDH、SDHA、HPRTI、YWHAZ 和 B2M 更稳定。总之,ACTB 可用于正常甲状腺和甲状腺肿组织中 RT-qPCR 数据的标准化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c2e0/4037571/992c2c4a91fd/BMRI2014-198582.001.jpg

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