1 Molecular Biotechnology Unit, Laboratories for Research and Development (LID), Universidad Peruana Cayetano Heredia , Peru .
High Alt Med Biol. 2014 Jun;15(2):146-54. doi: 10.1089/ham.2013.1121.
A study of chronic mountain sickness (CMS) with a candidate gene--vascular endothelial growth factor A (VEGFA)--was carried out in a Peruvian population living at high altitude in Cerro de Pasco (4380 m). The study was performed by genotyping of 11 tag SNPs encompassing 2.2 kb of region of VEGFA gene in patients with a diagnosis of CMS (n = 131; 49.1 ± 12.7 years old) and unrelated healthy controls (n = 84; 47.2 ± 13.4 years old). The VEGFA tag SNP rs3025033 was found associated with CMS (p < 0.05), individuals with AG genotype have 2.5 more risk of CMS compared to those with GG genotype (p < 0.02; OR, 2.54; 95% CI: 1.10-5.88). Pairwise Fst and Nei's distance indicate genetic differentiation between Cerro de Pasco population and HapMap3 population (Fst > 0.36, p < 0.01), suggesting selection is operating on the VEGF gene. Our results suggest that VEGFA is associated with CMS in long-term residents at high altitude in the Peruvian Andes.
一项针对慢性高山病(CMS)与候选基因——血管内皮生长因子 A(VEGFA)的研究在秘鲁塞罗德帕斯科(海拔 4380 米)的高海拔地区的居民中进行。该研究通过对 VEGFA 基因 2.2kb 区域的 11 个标签 SNP 进行基因分型,对诊断为 CMS 的患者(n=131;49.1±12.7 岁)和无关的健康对照组(n=84;47.2±13.4 岁)进行了研究。发现 VEGFA 标签 SNP rs3025033 与 CMS 相关(p<0.05),与 GG 基因型相比,AG 基因型个体患 CMS 的风险增加 2.5 倍(p<0.02;OR,2.54;95%CI:1.10-5.88)。成对的 Fst 和 Nei 的距离表明,塞罗德帕斯科人群与 HapMap3 人群之间存在遗传分化(Fst>0.36,p<0.01),这表明选择作用于 VEGF 基因。我们的研究结果表明,在秘鲁安第斯山脉高海拔地区的长期居民中,VEGFA 与 CMS 相关。