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干扰素γ诱导蛋白(IFI)16在转录水平上调控I型干扰素及其他干扰素刺激基因,并控制对DNA和RNA病毒的干扰素反应。

Interferon γ-inducible protein (IFI) 16 transcriptionally regulates type i interferons and other interferon-stimulated genes and controls the interferon response to both DNA and RNA viruses.

作者信息

Thompson Mikayla R, Sharma Shruti, Atianand Maninjay, Jensen Søren B, Carpenter Susan, Knipe David M, Fitzgerald Katherine A, Kurt-Jones Evelyn A

机构信息

From the Division of Infectious Disease and Immunology, Department of Medicine, University of Massachusetts Medical School, Worcester, Massachusetts 01605.

Department of Biomedicine, Aarhus University, 8000 Aarhus, Denmark, and.

出版信息

J Biol Chem. 2014 Aug 22;289(34):23568-81. doi: 10.1074/jbc.M114.554147. Epub 2014 Jul 7.

Abstract

The interferon γ-inducible protein 16 (IFI16) has recently been linked to the detection of nuclear and cytosolic DNA during infection with herpes simplex virus-1 and HIV. IFI16 binds dsDNA via HIN200 domains and activates stimulator of interferon genes (STING), leading to TANK (TRAF family member-associated NF-κB activator)-binding kinase-1 (TBK1)-dependent phosphorylation of interferon regulatory factor (IRF) 3 and transcription of type I interferons (IFNs) and related genes. To better understand the role of IFI16 in coordinating type I IFN gene regulation, we generated cell lines with stable knockdown of IFI16 and examined responses to DNA and RNA viruses as well as cyclic dinucleotides. As expected, stable knockdown of IFI16 led to a severely attenuated type I IFN response to DNA ligands and viruses. In contrast, expression of the NF-κB-regulated cytokines IL-6 and IL-1β was unaffected in IFI16 knockdown cells, suggesting that the role of IFI16 in sensing these triggers was unique to the type I IFN pathway. Surprisingly, we also found that knockdown of IFI16 led to a severe attenuation of IFN-α and the IFN-stimulated gene retinoic acid-inducible gene I (RIG-I) in response to cyclic GMP-AMP, a second messenger produced by cyclic GMP-AMP synthase (cGAS) as well as RNA ligands and viruses. Analysis of IFI16 knockdown cells revealed compromised occupancy of RNA polymerase II on the IFN-α promoter in these cells, suggesting that transcription of IFN-stimulated genes is dependent on IFI16. These results indicate a broader role for IFI16 in the regulation of the type I IFN response to RNA and DNA viruses in antiviral immunity.

摘要

干扰素γ诱导蛋白16(IFI16)最近被发现与单纯疱疹病毒1型和HIV感染期间细胞核和细胞质DNA的检测有关。IFI16通过HIN200结构域结合双链DNA,并激活干扰素基因刺激因子(STING),导致TANK(TRAF家族成员相关的NF-κB激活剂)结合激酶1(TBK1)依赖的干扰素调节因子(IRF)3磷酸化以及I型干扰素(IFN)和相关基因的转录。为了更好地理解IFI16在协调I型IFN基因调控中的作用,我们构建了IFI16稳定敲低的细胞系,并检测了对DNA和RNA病毒以及环二核苷酸的反应。正如预期的那样,IFI16的稳定敲低导致对DNA配体和病毒的I型IFN反应严重减弱。相比之下,NF-κB调节的细胞因子IL-6和IL-1β的表达在IFI16敲低的细胞中未受影响,这表明IFI16在感知这些触发因素中的作用在I型IFN途径中是独特的。令人惊讶的是,我们还发现IFI16的敲低导致对环磷酸鸟苷-腺苷酸(cGAMP)、环磷酸鸟苷-腺苷酸合酶(cGAS)产生的第二信使以及RNA配体和病毒的IFN-α和IFN刺激基因视黄酸诱导基因I(RIG-I)的严重减弱。对IFI16敲低细胞的分析显示,这些细胞中RNA聚合酶II在IFN-α启动子上的占据受损,这表明IFN刺激基因的转录依赖于IFI16。这些结果表明IFI16在抗病毒免疫中对RNA和DNA病毒的I型IFN反应调节中具有更广泛的作用。

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